Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30980
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 140 1e-33
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 37 0.014
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 37 0.014
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 31 1.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 31 1.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 1.2
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 29 2.9
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical ... 29 2.9
AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical ... 29 2.9
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 3.8
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 3.8
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 29 3.8
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 29 3.8
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 3.8
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 3.8
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z78539-4|CAB01731.1| 591|Caenorhabditis elegans Hypothetical pr... 29 5.0
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 5.0
Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81132-12|CAE17968.1| 326|Caenorhabditis elegans Hypothetical p... 28 8.8
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 140 bits (338), Expect = 1e-33
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = +2
Query: 254 QPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQE 433
+P KLHKLD GP TS TL EDALK Y + ++RR+E+A+GNLYKEK IRGFCHLYSGQE
Sbjct: 50 KPCKLHKLDNGPNTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQE 109
Query: 434 AVAVGMRAAMRDADSVITAYRCHGWLISWAL 526
A AVGM+AAM + D+VITAYRCHGW +W L
Sbjct: 110 ACAVGMKAAMTEGDAVITAYRCHGW--TWLL 138
Score = 121 bits (292), Expect = 5e-28
Identities = 58/83 (69%), Positives = 64/83 (77%)
Frame = +1
Query: 511 YLMGVSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKYR 690
+L+G +V VL+ELTGR G GKGGSMH+Y +NFYGGNGIVGAQ PLGAGVA A KYR
Sbjct: 136 WLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTKNFYGGNGIVGAQQPLGAGVALAMKYR 195
Query: 691 ADGGVTFALYGDGAANQGQLFEA 759
V LYGDGAANQGQLFEA
Sbjct: 196 EQKNVCVTLYGDGAANQGQLFEA 218
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 140 bits (338), Expect = 1e-33
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = +2
Query: 254 QPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQE 433
+P KLHKLD GP TS TL EDALK Y + ++RR+E+A+GNLYKEK IRGFCHLYSGQE
Sbjct: 33 KPCKLHKLDNGPNTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQE 92
Query: 434 AVAVGMRAAMRDADSVITAYRCHGWLISWAL 526
A AVGM+AAM + D+VITAYRCHGW +W L
Sbjct: 93 ACAVGMKAAMTEGDAVITAYRCHGW--TWLL 121
Score = 121 bits (292), Expect = 5e-28
Identities = 58/83 (69%), Positives = 64/83 (77%)
Frame = +1
Query: 511 YLMGVSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKYR 690
+L+G +V VL+ELTGR G GKGGSMH+Y +NFYGGNGIVGAQ PLGAGVA A KYR
Sbjct: 119 WLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTKNFYGGNGIVGAQQPLGAGVALAMKYR 178
Query: 691 ADGGVTFALYGDGAANQGQLFEA 759
V LYGDGAANQGQLFEA
Sbjct: 179 EQKNVCVTLYGDGAANQGQLFEA 201
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 520 GVSVLGVLSELTGRRTGCSRGKGGSMHL--YGRNFYGGNGIVGAQVPLGAGVAFAHKYRA 693
G ++ +++ G +G+ MH RNF + + Q+P G A+A K +
Sbjct: 152 GYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQK 211
Query: 694 DGG-VTFALYGDGAANQGQLFEAYTCLNYGTCL 789
D + +GDGAA++G +A+ N+ L
Sbjct: 212 DNNRIAVVYFGDGAASEG---DAHAAFNFAATL 241
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 520 GVSVLGVLSELTGRRTGCSRGKGGSMHL--YGRNFYGGNGIVGAQVPLGAGVAFAHKYRA 693
G ++ +++ G +G+ MH RNF + + Q+P G A+A K +
Sbjct: 151 GYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQK 210
Query: 694 DGG-VTFALYGDGAANQGQLFEAYTCLNYGTCL 789
D + +GDGAA++G +A+ N+ L
Sbjct: 211 DNNRIAVVYFGDGAASEG---DAHAAFNFAATL 240
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 263 CRAD-FECRLF-FRAVFCVCRYNRCSHFRDCVSG 168
C++D ++C + + +V C+ Y RC + DC G
Sbjct: 92 CKSDQWQCDTYTWHSVSCIAEYQRCDNITDCADG 125
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 263 CRAD-FECRLF-FRAVFCVCRYNRCSHFRDCVSG 168
C++D ++C + + +V C+ Y RC + DC G
Sbjct: 92 CKSDQWQCDTYTWHSVSCIAEYQRCDNITDCADG 125
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 635 IPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 534
+P P PY C PP P PV P + + P
Sbjct: 109 VPAPAPVYEPYACAAPPCPPPTPVYEPYACAAPP 142
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = -2
Query: 659 PNGTCAPTIPLPP*KLRPYKCMEPPLP---REQPVLRPVSSESTPSTLTPMR 513
P AP P P PY C PP P QPV++ V P+R
Sbjct: 118 PYACAAPPCPPPTPVYEPYACAAPPCPAPVAPQPVIQHVPVPVPVQVPVPIR 169
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 656 NGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVS-SESTPST 528
+ T +P PP + P P PR +P+ +P S S +TP T
Sbjct: 110 DATVKTVVPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRT 153
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Frame = +3
Query: 150 SAAKFLAGNTITKVTAPVVATNAKYSTKKEATFE----ISPTNSI------NWIRALQHQ 299
SAA F++G T + A+YST +E F+ IS T S+ N+ Q Q
Sbjct: 168 SAAAFVSGMTAVPIQIRGRTLFAQYSTHRELKFDKNKAISDTESVANGSVSNFEVGTQQQ 227
Query: 300 PHSLLKMLLSCM 335
P+S+L+ ++ M
Sbjct: 228 PNSVLRTIIENM 239
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 344 TILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADS 478
T+ RRIET + K+ R LY+G E A G + + DAD+
Sbjct: 171 TLERRIETEKETIDIFKMTRESLGLYAGIEGGATGSKLVIIDADT 215
>AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical
protein Y57G7A.5 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 269 HKLDQGPATSATLTSE--DALKLYEQLTILRRIETASGNLYK-EKIIRGFCHLY 421
H LD+ L+ E D L ++ ++ R ETA GN+Y EK +R HLY
Sbjct: 50 HVLDEQTRLRTRLSEEFGDFLNRSKR-SLTRNFETADGNVYSFEKNLRELLHLY 102
>AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical
protein C54G6.2 protein.
Length = 700
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 671 PSPTSTAPTGESRSLCTET---EPPIRVNSSKPTH 766
P+P +TAPT R TE PP + SS PTH
Sbjct: 73 PNPYNTAPTHYRRRSSTEAHRYHPPRQPRSSAPTH 107
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -2
Query: 674 KATPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTL 525
KA P P G CAP +P P + RP PP PVL PV + +T L
Sbjct: 386 KADPCPGGFCAP-VPQAPQQERP----TPP-----PVLAPVINTATQPPL 425
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 173 KHNHESDCTGCSDKRKIQHEKRGDIRNQPYKLHKLDQGPATSATLTSEDALKLYEQLTIL 352
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 886 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 945
Query: 353 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 469
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 946 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 985
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 635 IPLPP*KLRPYKCMEPPLPREQPVLRPVS-SESTPST 528
+P PP + P P PR +P+ +P S S +TP T
Sbjct: 115 VPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRT 151
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 173 KHNHESDCTGCSDKRKIQHEKRGDIRNQPYKLHKLDQGPATSATLTSEDALKLYEQLTIL 352
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 850 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 909
Query: 353 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 469
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 910 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 949
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 173 KHNHESDCTGCSDKRKIQHEKRGDIRNQPYKLHKLDQGPATSATLTSEDALKLYEQLTIL 352
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 886 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 945
Query: 353 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 469
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 946 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 985
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 173 KHNHESDCTGCSDKRKIQHEKRGDIRNQPYKLHKLDQGPATSATLTSEDALKLYEQLTIL 352
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 886 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 945
Query: 353 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 469
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 946 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 985
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 614 LRPYKCMEPPLPREQPVLRPVSSESTPSTLTPM 516
+ P + PP+P PV+ PV S T + PM
Sbjct: 229 ISPSTRVPPPIPSRAPVMSPVQSPLTHPPVAPM 261
>Z78539-4|CAB01731.1| 591|Caenorhabditis elegans Hypothetical
protein C31E10.6 protein.
Length = 591
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +2
Query: 209 DKRKIQHEKRGDIRNQPYKLHKLD-QGPATSATLTSEDALKLYEQLT-ILRRIETASGNL 382
DK+K EKR +I Y L K++ AT + D+ L + +T +L+RI + ++
Sbjct: 91 DKKKTASEKRSEIAQIIYALQKINCPFDATEQEFLNVDSSVLVDIITWVLQRISRQTMDM 150
Query: 383 YKEKIIRG-FCHLYSGQEAVAVGMRAAMR 466
+ K F Y + A A+ +++R
Sbjct: 151 DRFKCFMACFNMKYEDEAAAALDFISSLR 179
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 614 LRPYKCMEPPLPREQPVLRPVSSESTPSTLTPM 516
+ P + PP+P PV+ PV S T + PM
Sbjct: 229 ISPSTRVPPPIPSRAPVMSPVQSPLTHPPVAPM 261
>Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical
protein R06C7.8 protein.
Length = 987
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 179 NHESDCTGCSDKRKIQHEKRGDIRNQPYKLHK 274
N+ES+ TGC +R+ + K+GDI L K
Sbjct: 624 NNESEITGCKIRRRSEIIKQGDINPWDETLRK 655
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 671 PSPTSTAPTGESRSLCTETEPPIRVNSSKPTHV 769
PSP+ P +SL T T PP + + P V
Sbjct: 353 PSPSKVVPNPPQKSLITPTVPPSMIQTVNPPTV 385
>Z81132-12|CAE17968.1| 326|Caenorhabditis elegans Hypothetical
protein T26E4.16 protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 272 YGVCRADFECRLFFRAVFCVCRYNRCSHFRDCV 174
YGV D C++FFR V N C +C+
Sbjct: 21 YGVLCCD-ACKMFFRRTLFVKNINSCHRLGECI 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,570
Number of Sequences: 27780
Number of extensions: 395832
Number of successful extensions: 1494
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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