Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30977
(719 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 129 5e-31
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 129 5e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 111 7e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 92 6e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 82 7e-17
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 36 0.008
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 33 0.054
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 32 0.072
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 0.17
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.38
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.51
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 29 0.51
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.67
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 29 0.88
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.88
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 29 0.88
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 28 1.5
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.7
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 27 3.6
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.6
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.6
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 3.6
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 27 3.6
SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 3.6
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 27 3.6
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 4.7
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 4.7
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 4.7
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 6.2
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 6.2
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 6.2
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 8.2
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 25 8.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 8.2
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 25 8.2
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 8.2
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 25 8.2
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 8.2
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 25 8.2
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 129 bits (311), Expect = 5e-31
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = -1
Query: 719 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 540
GERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 539 NDKGRLSKEE 510
NDKGRLSKEE
Sbjct: 503 NDKGRLSKEE 512
Score = 100 bits (240), Expect = 2e-22
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = -3
Query: 507 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCN 328
+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+ I
Sbjct: 514 DRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVK 573
Query: 327 DTIKWLDSNQLADKEEYEHKQKELE 253
+TI+WLD N A K+EYE KQKELE
Sbjct: 574 ETIEWLDHNTTAAKDEYEDKQKELE 598
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 129 bits (311), Expect = 5e-31
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = -1
Query: 719 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 540
GERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITIT
Sbjct: 443 GERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITIT 502
Query: 539 NDKGRLSKEE 510
NDKGRLSKEE
Sbjct: 503 NDKGRLSKEE 512
Score = 101 bits (241), Expect = 1e-22
Identities = 45/86 (52%), Positives = 65/86 (75%)
Frame = -3
Query: 507 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCN 328
+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+ SDK+T+
Sbjct: 514 DRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVK 573
Query: 327 DTIKWLDSNQLADKEEYEHKQKELEA 250
+TI+WLDSN A K+E+E KQKELE+
Sbjct: 574 ETIEWLDSNTTAAKDEFEAKQKELES 599
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 111 bits (268), Expect = 7e-26
Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = -1
Query: 719 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITI 543
GER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I
Sbjct: 472 GERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVI 531
Query: 542 TNDKGRLSKEE 510
NDKGRLS+E+
Sbjct: 532 KNDKGRLSEED 542
Score = 78.2 bits (184), Expect = 1e-15
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Frame = -3
Query: 507 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILDKC 331
ERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD
Sbjct: 544 ERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAV 603
Query: 330 NDTIKWLD-SNQLADKEEYEHKQKELEA 250
D +WL+ + A KEE+E ++++L+A
Sbjct: 604 EDVAEWLEIHGEDASKEEFEDQRQKLDA 631
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 92.3 bits (219), Expect = 6e-20
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = -1
Query: 719 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 540
GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+
Sbjct: 486 GERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVA 545
Query: 539 NDKGRLSKE 513
G E
Sbjct: 546 GSSGLTDSE 554
Score = 41.1 bits (92), Expect = 2e-04
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = -3
Query: 507 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDKQTILDK 334
E MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++ + + I D
Sbjct: 556 EAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITDL 615
Query: 333 CNDTIKWLDSNQLADKEEYEHKQKELEAFTIR 238
K ++ E+ + K E++ +++
Sbjct: 616 RETVAKVNAGDEGITSEDMKKKIDEIQQLSLK 647
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 82.2 bits (194), Expect = 7e-17
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = -1
Query: 719 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITIT 540
GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I IT
Sbjct: 448 GERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEIT 507
Query: 539 NDKGRLS 519
N G LS
Sbjct: 508 NSVGHLS 514
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 35.5 bits (78), Expect = 0.008
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Frame = -3
Query: 510 DERMVNEAEKYRNEDD-KQKETIQAKNALESYCFS-----MKSTMEDEKLKEKISDSD-K 352
D +NE +K+ +E+D T +N S S + +E + K +D+D K
Sbjct: 220 DSENINEVKKFEDEEDTSTPNTSSFQNNSSSLDLSDNLSYLLQYLEGNRSKINATDADVK 279
Query: 351 QTILDKCNDTIKWLDSNQLADKEEYEHKQK---ELEAFTIR*LRRCTRVPE-ESPE 196
Q + D + KW + ++ +E YE +K EL ++T L T+V + ++P+
Sbjct: 280 QLLSDVKKNKSKWANDQRIGQEELYEAAEKVVLELRSYTEHSLAFLTKVSKRDAPD 335
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 32.7 bits (71), Expect = 0.054
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = -1
Query: 626 VTFDIDANGILNVSA---IEKSTNKENKITITNDKGR---LSKEETSVWLMRQRSTETRM 465
VT + D + LN + +E K+N I N + LSKEE + +Q + R+
Sbjct: 49 VTHETDLDEFLNTAELGEVEFIAEKQNVTVIQNPEQNPFLLSKEEAARSKQKQEKNKDRL 108
Query: 464 TSKRRPSRPRMHWNLTASA 408
T RRP HW+ T +A
Sbjct: 109 TIPRRP-----HWDQTTTA 122
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 32.3 bits (70), Expect = 0.072
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -3
Query: 603 RYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDK-QKETIQAKNAL 427
+Y ++ R +H E++ + + +G++ER + A+ N+D E+ + A
Sbjct: 478 KYVRQIESRRIHFSKEEEKREREKSKGYRGQEERFIENADGADNDDSSASSESFASAGAH 537
Query: 426 ESYCFSMKSTMEDE 385
F +S + +E
Sbjct: 538 SRSVFPRRSNVSEE 551
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect(2) = 0.17
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 468 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 292
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 291 DK 286
DK
Sbjct: 238 DK 239
Score = 23.8 bits (49), Expect(2) = 0.17
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 219 RVPEESPEVCRASRAEHPEPEVP 151
++ ++ P RASRA EP+ P
Sbjct: 235 KLGDKGPAAARASRAAAEEPQAP 257
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 29.9 bits (64), Expect = 0.38
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -3
Query: 561 GEQDHHYQRQRSSLQGRDERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 385
G + +++ + ++ER+ EAE+ + E ++Q+ Q K E + K E E
Sbjct: 70 GSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELE 128
Query: 384 KL-KEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 259
KL KE+I ++Q ++ + ++ + Q +E+ +K+++
Sbjct: 129 KLEKERIRLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 0.51
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -3
Query: 519 QGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 340
Q +E ++EK ++ K + KNA ++ M DE+ E S K+
Sbjct: 96 QSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKK 155
Query: 339 DKC-NDTIKWLDSNQLADKEEYEHKQKE 259
K +D + LD + E+ + K+K+
Sbjct: 156 SKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 29.5 bits (63), Expect = 0.51
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 22/157 (14%)
Frame = -3
Query: 525 SLQGRDERMVNEA-EKYRNEDDKQ-------KETIQAKNALESYCFSMKSTMED------ 388
S+ +++R+ E EKYR + + ET+ KNALE Y + ++ ++D
Sbjct: 543 SVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFT 602
Query: 387 -----EKLKEKISDSDKQTILDKCNDTIKWLDSNQLAD--KEEYEHKQKELEAFTIR*LR 229
K KE ++ ++ + ++ DT K + + +L D + +Q+ L+A + R
Sbjct: 603 NEEESSKFKEMLTKAE-DWLYEEGEDTTKAVYTAKLEDLMRVGGPIRQRYLDAEEAK--R 659
Query: 228 RCTRVPEESPEVCRASRAEHPEPEVP-PPGLEALAPP 121
+ + E+ + S AE +P G APP
Sbjct: 660 QKVQAEREAAKAATKSEAEKQKPSGKFEEGTGGRAPP 696
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.67
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = -3
Query: 537 RQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 358
RQ++S+ + N+ E + DDKQ + KN+LE+ M+ + E K D
Sbjct: 1261 RQKTSIVAKYR---NKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDD 1316
Query: 357 DKQTILDKCNDTIK 316
++ LDK D K
Sbjct: 1317 NEMEDLDKMEDLEK 1330
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/86 (18%), Positives = 39/86 (45%)
Frame = -3
Query: 537 RQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 358
+QR + ++ N ++ + + KQK +Q K + S K E +KL + ++
Sbjct: 31 KQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKLDKGDEET 90
Query: 357 DKQTILDKCNDTIKWLDSNQLADKEE 280
++ D N ++ ++ ++ E+
Sbjct: 91 NETQQEDLLNTLLQQMEDTKITTAEK 116
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.88
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 378 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 253
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 28.7 bits (61), Expect = 0.88
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -3
Query: 387 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK--EEYEHKQKELEAFTIR*LRRCTRV 214
++ KE+ S S ++LD N + N + D+ E +HK +++ T+R L RC ++
Sbjct: 404 DRFKERKS-SLVHSLLDAANAIFESCGLNDIMDETLEFLKHKNPQVKTETLRWLNRCLQL 462
Query: 213 PEESP 199
+ P
Sbjct: 463 TDVCP 467
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = -3
Query: 390 DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEAFTIR*LRRCTRVP 211
DE+++ + D ++ L K N+ L+ N A EY + +E EAF IR RR
Sbjct: 29 DEEIESSLKDVRQE--LQKLNEEQSRLEKN--AQIPEY--RVRESEAFLIRMQRRLESAE 82
Query: 210 EESPEVCRAS 181
EE + RAS
Sbjct: 83 EEFEKQRRAS 92
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -3
Query: 534 QRSSLQGRDERMVNEAEKYR--NEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 361
+R+ +Q R + + N ++ E DK ET+ K A+ S+ +++++++ K+S
Sbjct: 219 ERNEMQERLDILTNLLDELTLLYETDKFDETM--KEAILSF-----EDLKEQEIRRKVSS 271
Query: 360 SDKQTILDKCNDTIKWL 310
D L+ CN+ + L
Sbjct: 272 DDVHNYLESCNNHLSML 288
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 501 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 397
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -1
Query: 641 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEETSVWLMRQRSTETRM 465
+P TF NG++N+S + ++ N E + DKGR + T V ++R++ + +
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIR-ATMVDVLREKFKDYGL 180
Query: 464 T 462
T
Sbjct: 181 T 181
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +1
Query: 586 ETLRIPLASMSKVTSI*GTPRGAGGIP 666
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 275 STSRKNWRHLQSDNYE-DVP 219
S +R NW H++ +NY D+P
Sbjct: 102 SVNRSNWDHIRQENYSPDIP 121
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3
Query: 531 RSSLQGRDERMVNEAEKYRNEDD----KQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 364
RS + +E E ++ N DD K++ + A N + Y + S + + +KEK S
Sbjct: 244 RSRARSSNEASYVEKDESSNSDDSISYKRRRSRNAANRITDY---VDSDLSESSMKEKQS 300
Query: 363 DSDKQTILDKCNDTIK 316
+K DK + K
Sbjct: 301 KIEKYMKSDKSSKNFK 316
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 3.6
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Frame = -3
Query: 624 HLRHRCQRY-PQRFRYREVHQQGEQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDKQKET 448
+L H Y P + R + +Q H + Q L+ + +M EKY++ D ++
Sbjct: 266 NLHHLINDYRPHQSRESLIMLLEKQLKHEESQVELLRTHNRQMTETLEKYKSLDFNMEKE 325
Query: 447 IQAKNALESYCFSMKSTMEDE-KLKEKISDSDK--QTILDKCNDTIK 316
L+S S EDE K + S +D+ + L+ D IK
Sbjct: 326 GDVIQQLKSSIKKPLSGAEDEQKSRSMFSKNDEKLKKSLELMEDVIK 372
>SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = -3
Query: 357 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEAFTIR*LRRCTRVPEESPEVCRASR 178
+K L K + WL Q K + QK+LE + +R + + E + S+
Sbjct: 183 NKVQTLGKAKNKKHWLGVYQSFGKASVDQIQKQLECYNVR-MMELNKTDENNESAICESQ 241
Query: 177 AEHPEPE 157
A E E
Sbjct: 242 ASSKEDE 248
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 3.6
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Frame = -3
Query: 540 QRQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 361
Q+ +++ +E AE+ N + ++E Q K A+E + + E E+ +E
Sbjct: 784 QKLAEAIREAEEEAARAAEEEANRELHEQEEAQ-KRAIEERTRAAREAKEREQ-REMAEK 841
Query: 360 SDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEAFTIR*LRR----CTRVPEESPEV 193
++Q + + D S +LA+K + + RR V +SP
Sbjct: 842 LERQRRIQQERDEEI---SRKLAEKAAARRANIGASSPSPGAWRRGGASAGGVSRDSPRY 898
Query: 192 CRA--SRAEHPEPEVPPPGLEALAPPSRRS 109
R SR P E P A PPSRR+
Sbjct: 899 SRGGYSRGSVPPRETLAPSKGAYVPPSRRN 928
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 587 SAIEKSTNKEN---KITITNDKGRLSKEETSVWLMRQRSTETRMTSKRRPSRPRMHWNLT 417
SA+EK K K+TIT+D ++S + + V + T + SK S + N
Sbjct: 41 SALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKSGHSSSQKLSNKV 100
Query: 416 ASA 408
+SA
Sbjct: 101 SSA 103
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 4.7
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = -3
Query: 498 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC---- 331
+NE + Y + + Q +T + L S C + S L + D + +L C
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 330 --NDTIKWLDSNQLADK 286
D+IK L N+ DK
Sbjct: 888 CVKDSIKRLGDNKFEDK 904
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 210 EESPEVCRASRAEHPEPE 157
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 6.2
Identities = 17/83 (20%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -3
Query: 507 ERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC 331
E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + + +
Sbjct: 494 EKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQHKRS 552
Query: 330 NDTIKWLDSNQLADKEEYEHKQK 262
+ + + D + + K+K
Sbjct: 553 SRKLLYEDKQAIQEAHTINTKRK 575
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -3
Query: 585 RYREVHQQGEQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDKQKE 451
R+R+ H + QD +R + D+R + YRN+ + +E
Sbjct: 171 RHRDRHHRSNQDRSRERSDNEQHSSDKR-EHSRRSYRNDRNNWRE 214
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = -3
Query: 564 QGEQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 400
+ E H +S + +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 285 KNEFSSHPAFNATSSETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 8.2
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -3
Query: 444 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 265
+A+ A + +E EK KEK D D++ DT+ D NQ+ +E E Q
Sbjct: 254 KAREARRRRSAQNSAKLEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQ 302
Query: 264 KELE 253
KE++
Sbjct: 303 KEVD 306
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 8.2
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 558 EQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE-K 382
+QD +Y+ QR + RD+ + Y Q+E A +Y ++ +++ +
Sbjct: 196 QQDGYYKDQRKLIAERDDEKTALDDLYNQRRALQREYDTQLRAFRTYEREQRAKRQEQFR 255
Query: 381 LKEKISDSDKQTI 343
L+ + + +K+ I
Sbjct: 256 LERENREKEKRRI 268
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/105 (15%), Positives = 44/105 (41%)
Frame = -3
Query: 576 EVHQQGEQDHHYQRQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 397
E ++ E+ + + ++ + +E+ EAE+ + ++K +A+ +
Sbjct: 544 EAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR 603
Query: 396 MEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 262
+EK K + + K+ +K + + +K + E ++K
Sbjct: 604 EAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEK 648
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 8.2
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 564 QGEQDHHYQRQRSSLQGRDERMVNEAEKYR---NEDDKQKETIQAKNALESYCFSMKSTM 394
Q + +H + L+ +RM N E+Y+ E +K+ + + KNA+ + M
Sbjct: 344 QEKLEHEQHSRNQKLEAAKQRMDNIREEYKVITQERNKKIQETEKKNAMIEMTEQKIAGM 403
Query: 393 EDEKLKEKIS 364
+E L+ +IS
Sbjct: 404 REE-LESQIS 412
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 438 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 313
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -3
Query: 543 YQRQRSSLQGRDERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 364
+ +Q SSL + N A + + K E + LE Y ++ D K++ K+
Sbjct: 831 FDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQVKTLEGYVETVLEKFNDLKIENKVP 890
Query: 363 DS 358
++
Sbjct: 891 ET 892
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.4 bits (53), Expect = 8.2
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 498 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC 331
V + E+ + D T+Q K +S FS K + E L +KIS+ D QT ++C
Sbjct: 402 VIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEIDSQTSFEQC 452
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = -3
Query: 603 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRD---ERMVNEAEKYRNEDDKQK 454
R P R +YRE H + + H R QGR ++ + +++Y ++ +
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSDRYTERENPDR 373
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,527,761
Number of Sequences: 5004
Number of extensions: 47431
Number of successful extensions: 289
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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