Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30976
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.85 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   4.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   7.9  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 217 D*NTINLKHLHCLILLINN 161
           D  T+NLKHL   +L++ N
Sbjct: 60  DTQTLNLKHLRAAVLVLTN 78


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 144 EAGVWELLINKIKQCKCFK 200
           E GV E+ I +  +CKC K
Sbjct: 121 ENGVMEIKIREPVECKCIK 139


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 144 EAGVWELLINKIKQCKCFK 200
           E GV E+ I +  +CKC K
Sbjct: 121 ENGVMEIKIREPVECKCIK 139


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 456 LGNQNKKKCFLGST*N*NKEKIPNFMIKI 542
           LGNQN + CF     N   +K+P F+ +I
Sbjct: 537 LGNQNSEMCFSLKFKN---KKLPVFLAEI 562


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 330 FWVIHNNDD*MNIKNKYRNL 389
           F V+ N+D+  NI  KY+ +
Sbjct: 103 FIVVKNDDNFRNISEKYQEI 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,539
Number of Sequences: 438
Number of extensions: 3220
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)