Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30975
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   5.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   9.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   9.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.6  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 236 QSMGLLQLTQVIGWHLKSLKQDSNILEVVYHLYEFNLVTR 355
           Q++ ++  T+   W L  +   +NI+ V++H YE  + TR
Sbjct: 97  QNLKVVATTKTKAWFLPFVV--TNIIFVLFHTYEAFVWTR 134


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 348 LLGKNVSLKDSQFELYLLYYYCKTNNKYV 434
           L+   VSL D  F+ Y LYY       +V
Sbjct: 256 LVSIGVSLFDVLFQAYYLYYVATGKASFV 284



 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 363 VSLKDSQFELYLLYYYC 413
           V L D   E+YLL Y C
Sbjct: 294 VWLMDEVVEIYLLVYAC 310


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 348 LLGKNVSLKDSQFELYLLYYYCKTNNKYV 434
           L+   VSL D  F+ Y LYY       +V
Sbjct: 256 LVSIGVSLFDVLFQAYYLYYVATGKASFV 284



 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 363 VSLKDSQFELYLLYYYC 413
           V L D   E+YLL Y C
Sbjct: 294 VWLMDEVVEIYLLVYAC 310


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = -1

Query: 88  HHYWKYRDRVTSHVHNKKIHGYLFQ 14
           H Y  +      H HN   H Y  Q
Sbjct: 279 HEYNSFNWTANGHGHNTSSHNYYAQ 303


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 136 LCSKQRLHRPHY*HANHHYW 77
           LC +  +  PH  H +  YW
Sbjct: 612 LCMQNLVINPHQQHLDAWYW 631


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 278 HLKSLKQDSNILEVVYHLYEFNL 346
           H++S ++D++ L V+Y    F L
Sbjct: 302 HIRSRQEDTDTLVVIYTFNLFYL 324


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 278 HLKSLKQDSNILEVVYHLYEFNL 346
           H++S ++D++ L V+Y    F L
Sbjct: 258 HIRSRQEDTDTLVVIYTFNLFYL 280


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 117 FTGLTINMPTIIIGNIEIE 61
           +T   +N P I + NIE++
Sbjct: 420 YTENQLNYPGITVSNIEVQ 438


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 115 HRPHY*HANHHY 80
           H PH  HA H Y
Sbjct: 41  HSPHLNHAMHPY 52


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 106 HY*HANHHYWKYRDRVTSHV 47
           H+ HA HH       V  HV
Sbjct: 322 HHHHAGHHIHAQHHVVNHHV 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,484
Number of Sequences: 336
Number of extensions: 2354
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)