Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30975
         (460 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336092-1|AAR24622.1|  183|Homo sapiens proliferation-inducing ...   117   2e-26
AK075227-1|BAC11486.1|  183|Homo sapiens protein ( Homo sapiens ...   117   2e-26
BC002583-1|AAH02583.1|  149|Homo sapiens TMEM85 protein protein.       73   6e-13

>AY336092-1|AAR24622.1|  183|Homo sapiens proliferation-inducing
           gene 17 protein.
          Length = 183

 Score =  117 bits (281), Expect = 2e-26
 Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   ALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVE-GTQAIGQ 178
           ALGPLKQ+PMNLFIMYMAGN+ISIFP MMV M+  RP++AL A  +TFKM+E  +Q   Q
Sbjct: 73  ALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSSQRFLQ 132

Query: 179 KIVYCIGNIVNILLALYKCQSMGLLQLTQVIGW 277
            +VY IGN++ + LA+YKCQSMGLL  T    W
Sbjct: 133 GLVYLIGNLMGLALAVYKCQSMGLLP-THASDW 164



 Score = 34.7 bits (76), Expect = 0.15
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 244 GIVTTHSSDWLAFEEPQTRLE 306
           G++ TH+SDWLAF EP  R+E
Sbjct: 155 GLLPTHASDWLAFIEPPERME 175


>AK075227-1|BAC11486.1|  183|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90746 fis, clone PLACE1011516. ).
          Length = 183

 Score =  117 bits (281), Expect = 2e-26
 Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   ALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVE-GTQAIGQ 178
           ALGPLKQ+PMNLFIMYMAGN+ISIFP MMV M+  RP++AL A  +TFKM+E  +Q   Q
Sbjct: 73  ALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSSQKFLQ 132

Query: 179 KIVYCIGNIVNILLALYKCQSMGLLQLTQVIGW 277
            +VY IGN++ + LA+YKCQSMGLL  T    W
Sbjct: 133 GLVYLIGNLMGLALAVYKCQSMGLLP-THASDW 164



 Score = 34.7 bits (76), Expect = 0.15
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 244 GIVTTHSSDWLAFEEPQTRLE 306
           G++ TH+SDWLAF EP  R+E
Sbjct: 155 GLLPTHASDWLAFIEPPERME 175


>BC002583-1|AAH02583.1|  149|Homo sapiens TMEM85 protein protein.
          Length = 149

 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +2

Query: 2   ALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFA 130
           ALGPLKQ+PMNLFIMYMAGN+ISIFP MMV M+  RP++AL A
Sbjct: 73  ALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMA 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,925,650
Number of Sequences: 237096
Number of extensions: 1308519
Number of successful extensions: 2073
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2064
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)