Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30975
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118945-1|AAM50805.1|  166|Drosophila melanogaster LD31024p pro...   140   6e-34
AE014296-3728|AAF51870.1|  166|Drosophila melanogaster CG11137-P...   140   6e-34
AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p pro...    29   2.3  
AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-P...    29   2.3  
AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p pro...    27   9.2  
AF241365-1|AAF98387.1|  279|Drosophila melanogaster cleavage and...    27   9.2  
AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-P...    27   9.2  
AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-P...    27   9.2  

>AY118945-1|AAM50805.1|  166|Drosophila melanogaster LD31024p
           protein.
          Length = 166

 Score =  140 bits (340), Expect = 6e-34
 Identities = 64/92 (69%), Positives = 75/92 (81%)
 Frame = +2

Query: 2   ALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVEGTQAIGQK 181
           ALGPLK +PMNLFIMYM+GNSISIFPIMMVGM+++RP+KA+F TQ T KM EG Q  GQ+
Sbjct: 56  ALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTGQR 115

Query: 182 IVYCIGNIVNILLALYKCQSMGLLQLTQVIGW 277
           IVY +GN+ N+ LALYKCQSMGLL  T    W
Sbjct: 116 IVYFLGNLANVALALYKCQSMGLLP-THASDW 146



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 244 GIVTTHSSDWLAFEEPQTRLEH 309
           G++ TH+SDWLAF +PQTRLE+
Sbjct: 137 GLLPTHASDWLAFVQPQTRLEY 158


>AE014296-3728|AAF51870.1|  166|Drosophila melanogaster CG11137-PA
           protein.
          Length = 166

 Score =  140 bits (340), Expect = 6e-34
 Identities = 64/92 (69%), Positives = 75/92 (81%)
 Frame = +2

Query: 2   ALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVEGTQAIGQK 181
           ALGPLK +PMNLFIMYM+GNSISIFPIMMVGM+++RP+KA+F TQ T KM EG Q  GQ+
Sbjct: 56  ALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTGQR 115

Query: 182 IVYCIGNIVNILLALYKCQSMGLLQLTQVIGW 277
           IVY +GN+ N+ LALYKCQSMGLL  T    W
Sbjct: 116 IVYFLGNLANVALALYKCQSMGLLP-THASDW 146



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 244 GIVTTHSSDWLAFEEPQTRLEH 309
           G++ TH+SDWLAF +PQTRLE+
Sbjct: 137 GLLPTHASDWLAFVQPQTRLEY 158


>AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p
           protein.
          Length = 1478

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 154 NHFESTLCSKQRLHRPHY*HANHHYWKYRDRVTSHVHNKKIHG 26
           NH +      Q+ H  H  H NHH  + + +   H+H  ++HG
Sbjct: 25  NHQQHHAGHHQQQHMHHQHHQNHHQ-QLQQQQLPHLHTLQLHG 66


>AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-PA
           protein.
          Length = 1843

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 154 NHFESTLCSKQRLHRPHY*HANHHYWKYRDRVTSHVHNKKIHG 26
           NH +      Q+ H  H  H NHH  + + +   H+H  ++HG
Sbjct: 390 NHQQHHAGHHQQQHMHHQHHQNHHQ-QLQQQQLPHLHTLQLHG 431


>AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p
           protein.
          Length = 1420

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 114 TGLTINMPTIIIGNI 70
           TG T+N PTI +GN+
Sbjct: 571 TGFTVNQPTIFVGNL 585


>AF241365-1|AAF98387.1|  279|Drosophila melanogaster cleavage and
           polyadenylation specificityfactor protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 114 TGLTINMPTIIIGNI 70
           TG T+N PTI +GN+
Sbjct: 212 TGFTVNQPTIFVGNL 226


>AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-PA,
           isoform A protein.
          Length = 1455

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 114 TGLTINMPTIIIGNI 70
           TG T+N PTI +GN+
Sbjct: 606 TGFTVNQPTIFVGNL 620


>AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-PB,
           isoform B protein.
          Length = 1420

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 114 TGLTINMPTIIIGNI 70
           TG T+N PTI +GN+
Sbjct: 571 TGFTVNQPTIFVGNL 585


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,198,276
Number of Sequences: 53049
Number of extensions: 389373
Number of successful extensions: 945
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)