Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30975
(460 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.52
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 0.91
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 0.91
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 3.7
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 3.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 4.8
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 8.5
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 8.5
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 8.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 8.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 8.5
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.6 bits (51), Expect = 0.52
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +2
Query: 203 IVNILLALYKCQSMGLLQLTQVIGWHLKSLKQDSNILEV 319
+ ++ A+ +C + G GW + L D N EV
Sbjct: 354 VAGVMRAVKRCNATGAFSWIGSDGWSARGLVSDGNEAEV 392
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 0.91
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 172 RTKNCLLYRKYSKHSFSTL*VSEYGIVTTHSSD 270
RT CLL R S+++F++ +S G H SD
Sbjct: 624 RTLPCLLPRPKSENNFASQELSREGRRIFHKSD 656
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 0.91
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 172 RTKNCLLYRKYSKHSFSTL*VSEYGIVTTHSSD 270
RT CLL R S+++F++ +S G H SD
Sbjct: 592 RTLPCLLPRPKSENNFASQELSREGRRIFHKSD 624
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +1
Query: 88 GWHVNSEAGEGAVCYTKYFQNG*RYTSY 171
GW+ G C T YF G SY
Sbjct: 189 GWNRYVPEGNMTACGTDYFNRGLLSASY 216
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +1
Query: 88 GWHVNSEAGEGAVCYTKYFQNG*RYTSY 171
GW+ G C T YF G SY
Sbjct: 65 GWNRYVPEGNMTACGTDYFNRGLLSASY 92
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 4.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 245 PYSDTYRVLKECLLYFRYNKQFFV 174
PYS V E L +F Y K F+
Sbjct: 150 PYSHQTDVWVELLKHFNYMKVIFI 173
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 8.5
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -1
Query: 91 NHHYWKYRDR 62
NH+ W Y+D+
Sbjct: 140 NHYLWLYKDK 149
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +3
Query: 318 WFITYMNLI*LLGKNVSLKDSQFELYLLYYYCK 416
W I Y +++ + SL+D + ++ + Y K
Sbjct: 7 WLILYFSIVCQAKAHYSLRDFKANIFQVKYQWK 39
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 159 PSTILKVLCVANSAFTGLTIN 97
P TILK LC A L +N
Sbjct: 258 PGTILKKLCPQEEACFRLLMN 278
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 159 PSTILKVLCVANSAFTGLTIN 97
P TILK LC A L +N
Sbjct: 173 PGTILKKLCPQEEACFRLLMN 193
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 159 PSTILKVLCVANSAFTGLTIN 97
P TILK LC A L +N
Sbjct: 492 PGTILKKLCPQEEACFRLLMN 512
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,536
Number of Sequences: 438
Number of extensions: 2768
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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