Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30974
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    26   0.34 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.2  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 601 GWSNLVWADLVYLSVFCGSKCD 666
           GW++ + A L Y + +CG +C+
Sbjct: 284 GWNDWIVAPLGYDAYYCGGECE 305


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 119 DLSIHRDRESDLVLYYVV 66
           +++I  DRE+ L+ +YVV
Sbjct: 223 EVAIKEDREAGLIPFYVV 240


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 220 SPLFNGCYYTYKTFFSITLSI 158
           +PLF+G  Y++ TF  + + +
Sbjct: 65  NPLFDGQLYSFNTFAKLLIFV 85


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = -3

Query: 266 CDPPASLRKLQFIIDFSTI*WMLLYI*NFLFNHFI 162
           CD    LR     I  +   W+++ + N+ F   I
Sbjct: 87  CDNEPKLRHYLIFIFVNVFFWVIILMSNYAFTRII 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,420
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)