Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30974
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068531-1|AAH68531.1|  856|Homo sapiens ATPase, H+ transporting...    31   5.2  
BC022300-1|AAH22300.1|  372|Homo sapiens ATP6V0A2 protein protein.     31   5.2  
AF112972-1|AAD04632.1|  856|Homo sapiens TJ6 protein.                  31   5.2  

>BC068531-1|AAH68531.1|  856|Homo sapiens ATPase, H+ transporting,
           lysosomal V0 subunit a2 protein.
          Length = 856

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 476 FIKYISCEA--QFYSNIIRVYLKVFWRMWHLINMCDWSMSHYILDGPIW 616
           +++ + C+A    YS +I+V  K    ++H++NMC + +++  L   +W
Sbjct: 283 YLRQVLCKAAESVYSRVIQV--KKMKAIYHMLNMCSFDVTNKCLIAEVW 329


>BC022300-1|AAH22300.1|  372|Homo sapiens ATP6V0A2 protein protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 476 FIKYISCEA--QFYSNIIRVYLKVFWRMWHLINMCDWSMSHYILDGPIW 616
           +++ + C+A    YS +I+V  K    ++H++NMC + +++  L   +W
Sbjct: 283 YLRQVLCKAAESVYSRVIQV--KKMKAIYHMLNMCSFDVTNKCLIAEVW 329


>AF112972-1|AAD04632.1|  856|Homo sapiens TJ6 protein.
          Length = 856

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +2

Query: 476 FIKYISCEA--QFYSNIIRVYLKVFWRMWHLINMCDWSMSHYILDGPIW 616
           +++ + C+A    YS +I+V  K    ++H++NMC + +++  L   +W
Sbjct: 283 YLRQVLCKAAESVYSRVIQV--KKMKAIYHMLNMCSFDVTNKCLIAEVW 329


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,233,393
Number of Sequences: 237096
Number of extensions: 1657339
Number of successful extensions: 2459
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2459
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)