Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30974
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical p...    29   4.2  
AF106575-13|AAC78162.2|  393|Caenorhabditis elegans Serpentine r...    28   5.5  
AL032661-3|CAA21756.1|  163|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      27   9.6  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    27   9.6  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    27   9.6  

>U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical protein
            R04A9.2 protein.
          Length = 1057

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -1

Query: 682  LNLKSNHIYYHKIQINRPGLPIPNWTIQNIVRHGPIAHVNQMPHSPKNFQVNSYNVRIK 506
            +N+  +  + H++    P +P  ++  QN+ + G   H N   H+ K   +N Y+ RIK
Sbjct: 963  MNVTYHLAFAHQVSYAPPAIPNVSYAAQNLAKRG---HNNYKTHT-KLVDMNDYSYRIK 1017


>Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical
           protein F14H3.10 protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -1

Query: 637 NRPGLPIPNWTIQNIVRHGPIAHVNQMPHSPKNFQVNSYNV 515
           +RP  P  N TI  I RH  I +VN    + +    N Y V
Sbjct: 353 DRPNTPYLNATIAEIQRHASILNVNFWRINHETIHFNDYQV 393


>AF106575-13|AAC78162.2|  393|Caenorhabditis elegans Serpentine
           receptor, class w protein96 protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 583 HVALYFGWSNLVWADLV 633
           ++ALY  W  LVW DLV
Sbjct: 114 YLALYIAWVTLVWCDLV 130


>AL032661-3|CAA21756.1|  163|Caenorhabditis elegans Hypothetical
           protein Y73F4A.3 protein.
          Length = 163

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 646 IQINRPGLPIPNWTIQNIVRHGPIAHVNQMPHSPKNFQVNS 524
           + +N  G+ I N    N V+ GPI + N   H+ +  QVN+
Sbjct: 116 VPLNFNGMNIQNCQTWNFVQSGPINNGNMGVHTSRPDQVNN 156


>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 203 MLLYI*NFLFNHFIY*KKPHQNPLRSFKDLSIHRDRESDLV 81
           +L YI N  FNH IY ++  Q  ++  ++LSI  +  S +V
Sbjct: 317 ILHYIDNETFNHLIYLQRLLQQCMKHCRELSIPNNSISQVV 357


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 203 MLLYI*NFLFNHFIY*KKPHQNPLRSFKDLSIHRDRESDLV 81
           +L YI N  FNH IY ++  Q  ++  ++LSI  +  S +V
Sbjct: 317 ILHYIDNETFNHLIYLQRLLQQCMKHCRELSIPNNSISQVV 357


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 203 MLLYI*NFLFNHFIY*KKPHQNPLRSFKDLSIHRDRESDLV 81
           +L YI N  FNH IY ++  Q  ++  ++LSI  +  S +V
Sbjct: 317 ILHYIDNETFNHLIYLQRLLQQCMKHCRELSIPNNSISQVV 357


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 203 MLLYI*NFLFNHFIY*KKPHQNPLRSFKDLSIHRDRESDLV 81
           +L YI N  FNH IY ++  Q  ++  ++LSI  +  S +V
Sbjct: 317 ILHYIDNETFNHLIYLQRLLQQCMKHCRELSIPNNSISQVV 357


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 203 MLLYI*NFLFNHFIY*KKPHQNPLRSFKDLSIHRDRESDLV 81
           +L YI N  FNH IY ++  Q  ++  ++LSI  +  S +V
Sbjct: 317 ILHYIDNETFNHLIYLQRLLQQCMKHCRELSIPNNSISQVV 357


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,113,769
Number of Sequences: 27780
Number of extensions: 280053
Number of successful extensions: 548
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)