Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30973X
(484 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 105 5e-22
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 104 1e-21
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 102 5e-21
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 100 2e-20
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 90 3e-17
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 83 2e-15
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 81 1e-14
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 76 5e-13
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 75 8e-13
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 74 2e-12
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 69 7e-11
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 68 1e-10
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 68 1e-10
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 68 1e-10
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 68 1e-10
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 64 2e-09
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 60 2e-08
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 59 4e-08
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 58 1e-07
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 58 1e-07
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 42 0.007
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 42 0.010
UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2; Ostr... 41 0.017
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 40 0.029
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 39 0.068
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.12
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 37 0.21
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 37 0.27
UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine ac... 33 4.5
UniRef50_A3TKF8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q1ERA3 Cluster: ATP-dependent RNA helicase; n=1; uncult... 33 4.5
UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_A3U2M0 Cluster: Putative lipid A biosynthesis lauroyl a... 32 7.8
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 105 bits (252), Expect = 5e-22
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRI 101
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 56.0 bits (129), Expect = 4e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KA+ GYK GLRNQ E+TALLK+EG R++ FY
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFY 42
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 104 bits (249), Expect = 1e-21
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNS VRAKF+SNLPA+A+GHRI
Sbjct: 21 KRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSSMVRAKFRSNLPAKAIGHRI 77
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 78 RVMLYPSRI 86
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 102 bits (244), Expect = 5e-21
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K CVYVYRA+K+ P R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG RI
Sbjct: 62 KRCVYVYRAEKKKVFPR--RQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRI 119
Query: 437 RVMLYPSRI 463
RVMLYPSR+
Sbjct: 120 RVMLYPSRV 128
Score = 60.1 bits (139), Expect = 3e-08
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3
Query: 126 RHGRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
R GRLY KA TGY+ GLRNQHE+TALL+++G +R FY
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFY 59
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 100 bits (239), Expect = 2e-20
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K CVYVY+A+ + +P P K T++RA+WGKVTR HGN+G+VRA+F NLP AMGHRI
Sbjct: 90 KRCVYVYKAETKKCVPQHPERK-TRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRI 148
Query: 437 RVMLYPSRI 463
R+MLYPSRI
Sbjct: 149 RIMLYPSRI 157
Score = 67.7 bits (158), Expect = 1e-10
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +3
Query: 126 RHGRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
RHGRL+AKAV TGYK GLRNQHEN A+LK+EGA+ + FY
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFY 87
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 89.8 bits (213), Expect = 3e-17
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K CV++Y+AK + P R ++LRAIWGKVTRPHG+SGSVRAKF NLPA MG ++
Sbjct: 106 KRCVFLYKAKTKELKPHSKRK--SRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKV 163
Query: 437 RVMLYPSRI 463
R+MLYPS I
Sbjct: 164 RIMLYPSNI 172
Score = 59.7 bits (138), Expect = 3e-08
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3
Query: 126 RHGRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
RHGRLYA+A+ TG+K G RNQH NT+LL +E + DA FY
Sbjct: 62 RHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFY 103
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 83.4 bits (197), Expect = 2e-15
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K VY+Y+A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G RI
Sbjct: 58 KRVVYLYKAHNKTLKTGHTVA--TRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRI 115
Query: 437 RVMLYPSRI 463
RV+LYPS I
Sbjct: 116 RVLLYPSNI 124
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +3
Query: 102 VLRKASQPRHGRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFYA 254
V R+ S P GRLY KA+ TG+K GLR Q E+T+LLK+EG ++ DA FYA
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYA 56
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 81.4 bits (192), Expect = 1e-14
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K Y+Y+AK ++ T+ R IWGKVTRPHGNSG VRAKFKSNLP ++MG ++
Sbjct: 52 KRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKV 103
Query: 437 RVMLYPSRI 463
RV +YPS I
Sbjct: 104 RVFMYPSSI 112
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFYA 254
RLY + + GYK NQ+E T+L+++EG + D +YA
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYA 50
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 75.8 bits (178), Expect = 5e-13
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K +VYRAK+ RG + +R IWGKVTRPHGNSG VRA+F+ NLP ++ G +
Sbjct: 59 KKVAFVYRAKREV------RG--SNIRVIWGKVTRPHGNSGVVRAQFRHNLPPKSFGATV 110
Query: 437 RVMLYPSRI 463
RVMLYPS I
Sbjct: 111 RVMLYPSNI 119
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 74.9 bits (176), Expect = 8e-13
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 424
K C YVY+AK++T P RG+ K R IWGKVTR HGNSG VRA FK+NLPA+A+
Sbjct: 45 KKCAYVYKAKRKTKTP---RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFYAASIASMCTELRRGHQFP 305
RL+ KAV TGY GLRNQHE+TALL++EG ++ D FY + + +R + P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKTP 60
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 73.7 bits (173), Expect = 2e-12
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K YVYRA K RG +K+R +WGKVTR HGNSG VRA F++NLPA+ G +
Sbjct: 47 KRIAYVYRASKEV------RG--SKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASV 98
Query: 437 RVMLYPSRI 463
R+ LYPS I
Sbjct: 99 RIFLYPSNI 107
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 68.5 bits (160), Expect = 7e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K YVY+AK+ I G +++R IWG+++R HGNSG+V++KF++NLPA+ G
Sbjct: 118 KRVAYVYKAKRE--ING------SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFGASC 169
Query: 437 RVMLYPSRI 463
R+ML+PS I
Sbjct: 170 RIMLFPSNI 178
Score = 35.9 bits (79), Expect = 0.48
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
RLY K + G+K G RN N +LL++EG ++ A Y
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHY 115
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K YVY+AK + + T R IWGKV R HG SG VRAKFKS+LP+ ++G ++
Sbjct: 49 KKLCYVYKAKTKK--------QGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPSNSIGGKV 100
Query: 437 RVMLYPSRI 463
R MLYPS I
Sbjct: 101 RCMLYPSNI 109
Score = 41.1 bits (92), Expect = 0.013
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
RLY + ++ GYK NQ+ +T+L+K+EG D FY
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFY 46
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 68.1 bits (159), Expect = 1e-10
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +2
Query: 329 KLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 463
K++ IWGKV R HGNSG +RA+F++N+P +A G R+R+++YPS I
Sbjct: 102 KIKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDRVRILMYPSNI 146
Score = 36.3 bits (80), Expect = 0.36
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
RLY K V+ GYK RNQ N L+ + + A FY
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFY 83
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Frame = +2
Query: 257 KHCVYVYRAKK--RTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQAMG 427
K YVY KK R + + RA+WG+VTRPHGN+G +R KF +++PA A+G
Sbjct: 73 KRVCYVYHGKKVKRCVRWSKAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIG 132
Query: 428 HRIRVMLYPSRI 463
RIRV LYPS+I
Sbjct: 133 RRIRVYLYPSQI 144
Score = 42.3 bits (95), Expect = 0.006
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
RLY K L GY GL Q + TAL++VE R DA +Y
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWY 70
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +2
Query: 320 KFTKLRAI-WGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 463
KF K I WG +T+PHGNSG VRAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 54 KFDKQEFINWGVITQPHGNSGVVRAKFEKNLPPQMLGKQVRVMLYPSTI 102
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 424
K Y+Y+AK ++ T+ R IWGKVTRPHGNSG VRAKFKSNLP ++M
Sbjct: 72 KRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESM 119
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +2
Query: 326 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSR 460
TK RAIWG++++ HG++G V A+F NLP +A+G +RV LYP+R
Sbjct: 84 TKFRAIWGRISKSHGSNGVVTARFGRNLPPRAIGSTLRVFLYPNR 128
Score = 37.9 bits (84), Expect = 0.12
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
RL+ KAV TG++ Q+EN ALLK+E D + FY
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFY 66
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +2
Query: 359 RPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 463
+ HGNSG VRAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGHGIQVMLYPSSI 80
Score = 48.4 bits (110), Expect = 8e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KAV GYK G RNQ E+TALLK+E ++ FY
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFY 42
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +2
Query: 335 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRV 442
+ I+GK+ RPHGNSG VRA+F +NLP Q MGH++RV
Sbjct: 59 KPIFGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 344 WGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 463
WGK+ + HG+SG V+A+F NLP +AMG +RVMLYPS I
Sbjct: 66 WGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
Score = 41.9 bits (94), Expect = 0.007
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 135 RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFYAASIASMCTELRRGHQFP 305
++Y+K V+ GY+ Q+ N +L+K+EG R D+ FY + +++ + + P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNP 59
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 311 PRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 445
P GK K GK+ R HG G+VRA+F+ LP QA+G + ++
Sbjct: 48 PSGKLLK-----GKIVRVHGTKGAVRARFEKGLPGQALGDYVEII 87
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 41.5 bits (93), Expect = 0.010
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 341 IWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 451
+ G +TR HGNSG+VRA+F NL + +G + V LY
Sbjct: 70 VHGVITRIHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
>UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2;
Ostreococcus|Rep: Phytoene/squalene synthetase -
Ostreococcus tauri
Length = 437
Score = 40.7 bits (91), Expect = 0.017
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = -1
Query: 466 LDPGRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 332
LD GR++H S+ + +GR+V LELG A + HLAPD ++
Sbjct: 332 LDVGRVKHASHLTADRVGRQVLLELGPHDAARPVRPSHLAPDRSE 376
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 39.9 bits (89), Expect = 0.029
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 335 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
+ I GKV HGN+G+VR +F+ LP QA+G +
Sbjct: 54 KVIRGKVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 38.7 bits (86), Expect = 0.068
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 347 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 445
GK+ R HG G V A FK +LP QA+G +++++
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVGTKVKIV 85
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 37.9 bits (84), Expect = 0.12
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1
Query: 424 HSLGREVRLELGSDTARVAMWAGHLAPDSTQL 329
H LGR++ LELGSD V + +G LAP +T++
Sbjct: 60 HGLGRQIGLELGSDNTTVTVRSGDLAPXATKV 91
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 37.1 bits (82), Expect = 0.21
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 129 HG-RLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFYAASIASMCTELRRGHQFP 305
HG RLY K Y+ G R + NT+L+K+EG +D A FY + +R Q
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREVQGS 64
Query: 306 EVPV 317
++ V
Sbjct: 65 KIRV 68
Score = 35.9 bits (79), Expect = 0.48
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSG----SVRAKFKSNLPA 415
K +VYRAK+ + G +K+R IWGKVTR HG G +++ +F S P+
Sbjct: 49 KKVAFVYRAKRE--VQG------SKIRVIWGKVTRTHGQLGRCPCAIQTQFFSQSPS 97
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 36.7 bits (81), Expect = 0.27
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2
Query: 347 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 463
GK+ HG+ G V A FK NLP QA G V +YP I
Sbjct: 61 GKIVHVHGSKGVVIAVFKPNLPGQARGG--NVYIYPKGI 97
>UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine
actinobacterium PHSC20C1|Rep: Phage-related integrase -
marine actinobacterium PHSC20C1
Length = 333
Score = 32.7 bits (71), Expect = 4.5
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 454 RIQHHS-YSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 332
R QH S +++ H+ + L+ G+D A +A+W GH +P +TQ
Sbjct: 253 RGQHISPHTLRHATAMHL-LQSGTDLATIALWLGHSSPATTQ 293
>UniRef50_A3TKF8 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 255
Score = 32.7 bits (71), Expect = 4.5
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -1
Query: 463 DPGRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGKFATGTSGN-WCPL 287
D GR+ S VS + G E+RLE+ + V + + QL FA SG W +
Sbjct: 57 DDGRLDLGSLRVSGTEGMELRLEIDQEQQNVIAATAVVGESALQLQAFAAPRSGGLWAEI 116
Query: 286 LSSVHI 269
S + +
Sbjct: 117 RSEIAV 122
>UniRef50_Q1ERA3 Cluster: ATP-dependent RNA helicase; n=1;
uncultured crenarchaeote 31-F-01|Rep: ATP-dependent RNA
helicase - uncultured crenarchaeote 31-F-01
Length = 589
Score = 32.7 bits (71), Expect = 4.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 148 RPYSQDISLVYATSTRTPLSSRLKEQKTVMMQSFMLQALRLCVQS 282
RPY QD + + T T TP+ R++E +QS + + RL V S
Sbjct: 241 RPYIQDTKIEFVTITLTPVMRRIREHVERALQSRLEELKRLGVIS 285
>UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 204
Score = 32.3 bits (70), Expect = 5.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 412 REVRLELGSDTARVAMWAGHLAPDSTQLGKFAT 314
++VRL LG DT RV H AP +T+L F T
Sbjct: 94 KQVRLALGEDTQRVRRVILHTAPANTELQTFLT 126
>UniRef50_A3U2M0 Cluster: Putative lipid A biosynthesis lauroyl
acyltransferase; n=1; Oceanicola batsensis HTCC2597|Rep:
Putative lipid A biosynthesis lauroyl acyltransferase -
Oceanicola batsensis HTCC2597
Length = 304
Score = 31.9 bits (69), Expect = 7.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 459 LEGYSITRILCPIA-WAGRLDLNLARTLPELP 367
L G+ ++RI+ P+A W R+ NLA P+LP
Sbjct: 40 LAGWLVSRIVAPLAGWRRRIRTNLAHAWPDLP 71
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,835,254
Number of Sequences: 1657284
Number of extensions: 10339844
Number of successful extensions: 28829
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 27952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28815
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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