Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30973X
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 105 8e-23
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 105 8e-23
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 105 8e-23
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 105 8e-23
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 105 8e-23
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 102 6e-22
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 66 5e-11
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 33 0.53
AK055778-1|BAB71011.1| 1113|Homo sapiens protein ( Homo sapiens ... 32 1.2
AF391558-1|AAO13803.1| 1192|Homo sapiens myosin IIIB variant MYO... 32 1.2
AF391557-1|AAO13802.1| 1275|Homo sapiens myosin IIIB variant MYO... 32 1.2
AF391556-1|AAO13801.1| 1314|Homo sapiens myosin IIIB variant MYO... 32 1.2
AF391555-1|AAO13800.1| 1341|Homo sapiens myosin IIIB variant MYO... 32 1.2
AF391554-1|AAO13799.1| 1251|Homo sapiens myosin IIIB variant MYO... 32 1.2
AF369908-1|AAL57233.1| 1278|Homo sapiens myosin IIIB protein. 32 1.2
AC114794-1|AAY24159.1| 249|Homo sapiens unknown protein. 32 1.2
AM082137-1|CAL06283.1| 101|Homo sapiens immunoglobulin heavy ch... 29 6.5
AK126039-1|BAC86408.1| 214|Homo sapiens protein ( Homo sapiens ... 29 8.6
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 105 bits (252), Expect = 8e-23
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRI 101
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 56.0 bits (129), Expect = 7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KA+ GYK GLRNQ E+TALLK+EG R++ FY
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFY 42
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 105 bits (252), Expect = 8e-23
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRI 101
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 56.0 bits (129), Expect = 7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KA+ GYK GLRNQ E+TALLK+EG R++ FY
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFY 42
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 105 bits (252), Expect = 8e-23
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRI 101
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 56.0 bits (129), Expect = 7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KA+ GYK GLRNQ E+TALLK+EG R++ FY
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFY 42
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 105 bits (252), Expect = 8e-23
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRI 101
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 56.0 bits (129), Expect = 7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KA+ GYK GLRNQ E+TALLK+EG R++ FY
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFY 42
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 105 bits (252), Expect = 8e-23
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRI 101
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 56.0 bits (129), Expect = 7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KA+ GYK GLRNQ E+TALLK+EG R++ FY
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFY 42
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 102 bits (245), Expect = 6e-22
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 436
K C YVY+AK T PGG K K R IWGKVTR HGNSG V AKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVLAKFRSNLPAKAIGHRI 101
Query: 437 RVMLYPSRI 463
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 56.0 bits (129), Expect = 7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++KA+ GYK GLRNQ E+TALLK+EG R++ FY
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFY 42
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 66.5 bits (155), Expect = 5e-11
Identities = 34/55 (61%), Positives = 36/55 (65%)
Frame = +2
Query: 257 KHCVYVYRAKKRTPIPGGPRGKFTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 421
K C VY+AK T IPG K K R IWGKVTR H NSG V AKF SNLPA+A
Sbjct: 44 KRCACVYKAKSNTMIPGS---KPNKSRVIWGKVTRAHRNSGMVAAKFHSNLPAKA 95
Score = 47.6 bits (108), Expect = 2e-05
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFY 251
GRL++K+ GYK L+NQ E+TALLK+EG +++ FY
Sbjct: 2 GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFY 41
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 33.1 bits (72), Expect = 0.53
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 132 GRLYAKAVLTGYKPGLRNQ 188
GRL++KA+ GYK GLRNQ
Sbjct: 3 GRLWSKAIFAGYKRGLRNQ 21
>AK055778-1|BAB71011.1| 1113|Homo sapiens protein ( Homo sapiens
cDNA FLJ31216 fis, clone KIDNE2004084, moderately
similar to Morone saxatilis myosin heavy chain FM3A
(FM3A) mRNA. ).
Length = 1113
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 192 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 248
>AF391558-1|AAO13803.1| 1192|Homo sapiens myosin IIIB variant
MYO3B.5 protein.
Length = 1192
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391557-1|AAO13802.1| 1275|Homo sapiens myosin IIIB variant
MYO3B.4 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391556-1|AAO13801.1| 1314|Homo sapiens myosin IIIB variant
MYO3B.3 protein.
Length = 1314
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391555-1|AAO13800.1| 1341|Homo sapiens myosin IIIB variant
MYO3B.2 protein.
Length = 1341
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391554-1|AAO13799.1| 1251|Homo sapiens myosin IIIB variant
MYO3B.1 protein.
Length = 1251
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF369908-1|AAL57233.1| 1278|Homo sapiens myosin IIIB protein.
Length = 1278
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AC114794-1|AAY24159.1| 249|Homo sapiens unknown protein.
Length = 249
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 205 SSRLKEQKTVMMQSFMLQALRLCVQS*EEDTNSRRSPWQIYQAACYLGQGDPPTWQL 375
S+RL+ +V +M + C Q + ++R W + A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AM082137-1|CAL06283.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 114 ASQPRHGRLYAKAVLTGYKPGLRNQHENTALLKVEGAKDRNDAVFYAA 257
A R GR Y +TG R+ +NT L++ G + + AV+Y A
Sbjct: 53 AMSGRGGRTYYAGSVTGRFSISRDNSKNTLYLQMNGLRVEDTAVYYCA 100
>AK126039-1|BAC86408.1| 214|Homo sapiens protein ( Homo sapiens
cDNA FLJ44051 fis, clone TESTI4033433. ).
Length = 214
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 383 HCQSCHVGGSPCPR*HAAW*ICHGDLRELVSSS*LCTHRRNAC 255
HC C GG P P+ H AW + + S + HRR+ C
Sbjct: 136 HCSHCP-GGQPGPQLHRAWTVWSWAVPSSASRACGDGHRRSTC 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,086,686
Number of Sequences: 237096
Number of extensions: 1770902
Number of successful extensions: 10915
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10908
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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