Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30972X
(482 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 142 2e-35
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 111 4e-26
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 69 5e-13
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 66 3e-12
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 64 1e-11
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 60 2e-10
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 58 9e-10
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 55 6e-09
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 54 1e-08
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 48 6e-07
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 45 7e-06
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 44 1e-05
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 42 4e-05
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 30 0.16
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 26 3.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 3.4
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 25 4.5
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 6.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.9
SPAC1B3.10c |||SEL1 repeat protein, unknown biological role|Schi... 25 7.9
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 142 bits (344), Expect = 2e-35
Identities = 62/89 (69%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = +1
Query: 217 PRHTI-RGRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 393
P T+ G F +TL+FP++YPL PP+MKF TEIWHPN+ NG+VCISILH PGDDK+GY
Sbjct: 45 PEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGY 104
Query: 394 EKASERWLPVHTVETILISVISMLADPND 480
E A ERWLPVH+ ETILISVISML+ PND
Sbjct: 105 EDAGERWLPVHSPETILISVISMLSSPND 133
Score = 86.6 bits (205), Expect = 2e-18
Identities = 38/64 (59%), Positives = 47/64 (73%)
Frame = +2
Query: 83 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*I 262
M S LL+KQL E+ KNP +GFS GL+DD I++WEV+IIGP DTLYEGGFF A
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60
Query: 263 FPRN 274
FP++
Sbjct: 61 FPQD 64
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 111 bits (268), Expect = 4e-26
Identities = 49/77 (63%), Positives = 60/77 (77%)
Frame = +1
Query: 250 STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHT 429
+TL FP +YPL PP +KF E +HPN+ K+G VCISILH PGDD YE +SERW PV +
Sbjct: 57 ATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQS 116
Query: 430 VETILISVISMLADPND 480
VE IL+SV+SMLA+PND
Sbjct: 117 VEKILLSVMSMLAEPND 133
Score = 48.8 bits (111), Expect = 4e-07
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2
Query: 83 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*I 262
MS+ + L K+ EL +N +G +AG +++D + W+ LI GP T +EGG + A
Sbjct: 1 MSKAMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLK 60
Query: 263 FP 268
FP
Sbjct: 61 FP 62
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 68.5 bits (160), Expect = 5e-13
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 432
+++FP +YP +PP++ F T I+HPNI+ NG +C+ IL ++W P T+
Sbjct: 53 SIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTI 99
Query: 433 ETILISVISMLADPN 477
+L+S+ S+L DPN
Sbjct: 100 SKVLLSICSLLTDPN 114
Score = 45.6 bits (103), Expect = 4e-06
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
+ ++LA+L K+P SAG + D D++ W+ I+GP D+ Y GG F
Sbjct: 6 INRELADLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVF 50
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 65.7 bits (153), Expect = 3e-12
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = +1
Query: 217 PRHTIRGRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 396
P+ + G T+ FP+EYP RPP+ +F ++HPN+ +G VC+SIL+E
Sbjct: 49 PKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNE--------- 99
Query: 397 KASERWLPVHTVETILISVISMLADPN 477
E W P T++ IL+ + +L DPN
Sbjct: 100 --EEGWKPAITIKQILLGIQDLLDDPN 124
Score = 31.1 bits (67), Expect = 0.091
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 182 DIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
D+ W+V I G P T +EGG +K FP
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFP 65
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 63.7 bits (148), Expect = 1e-11
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 432
+++FP YP PP + F + +WHPN+D +G++C+ IL ++W V+ V
Sbjct: 81 SMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDIL-------------KDKWSAVYNV 127
Query: 433 ETILISVISMLADPND 480
+TIL+S+ S+L +PN+
Sbjct: 128 QTILLSLQSLLGEPNN 143
Score = 38.3 bits (85), Expect = 6e-04
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPRN 274
L+ +L L + G SA D+++ W I GP DT YEG FK FP N
Sbjct: 33 LRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPAN 87
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 60.1 bits (139), Expect = 2e-10
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
L+F ++YP +PP +KFV+ ++HPN+ NG++C+ IL RW P + V
Sbjct: 57 LSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL-------------QNRWSPTYDVA 103
Query: 436 TILISVISMLADPND 480
IL S+ S+L DPN+
Sbjct: 104 AILTSIQSLLNDPNN 118
Score = 39.5 bits (88), Expect = 3e-04
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 250
L + + ++P G SA + DN + W +IIGP DT +E G FK
Sbjct: 9 LMRDFKRMQQDPPAGVSASPVSDN-VMLWNAVIIGPADTPFEDGTFK 54
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 57.6 bits (133), Expect = 9e-10
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
L P EYP+ PP ++F+T+I+HPN+DK G +C+S L + W P +
Sbjct: 55 LFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTL-------------KKDWSPALQIR 101
Query: 436 TILISVISMLADPN 477
T+L+S+ +++ PN
Sbjct: 102 TVLLSIQALMGAPN 115
Score = 30.7 bits (66), Expect = 0.12
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 116 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
K++ L ++P G A +DN Y +++ + GP + YEGG F
Sbjct: 9 KEIETLTRDPPPGIVAAPTEDNLRY-FKITMEGPQQSAYEGGKF 51
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 54.8 bits (126), Expect = 6e-09
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 432
+ P +YP RPP+M F T+I+HPN+ + G +C+ IL ++W PV+T+
Sbjct: 57 IEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDIL-------------KDQWSPVYTM 103
Query: 433 ETILISVISMLADP 474
++ LIS+ S+L P
Sbjct: 104 KSALISLQSLLCTP 117
Score = 31.5 bits (68), Expect = 0.069
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
+ K+LA++ ++ G I+D DI + + GP T YEGG+F
Sbjct: 9 IAKELADVQQDKQAGIQVWTIND-DISHLKGMFRGPEGTPYEGGYF 53
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 54.0 bits (124), Expect = 1e-08
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHE 369
+L FP +YP +PP ++F T I+HPN D G+VC++IL +
Sbjct: 59 SLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQ 97
Score = 46.8 bits (106), Expect = 2e-06
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 86 SEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IF 265
+ P SS L K+ ++L ++P+ L+DDN ++ W +GP D++Y GG F F
Sbjct: 4 ASPSSSRRLTKEYSDLREHPIPDIRVNLVDDN-LFHWACTALGPSDSVYAGGKFHFSLKF 62
Query: 266 P 268
P
Sbjct: 63 P 63
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 48.4 bits (110), Expect = 6e-07
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2
Query: 107 LLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
L+K+ LA L KNPVE A +N I +W +I GPPDT YEGG + IFP
Sbjct: 10 LMKEYLA-LQKNPVELVDAKPATEN-ILEWHYIITGPPDTPYEGGQYHGTLIFP 61
Score = 30.3 bits (65), Expect = 0.16
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 432
TL FP +YP +PP ++ +T N +C+S + + W P V
Sbjct: 57 TLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSF----------SDFHPKSWNPSWMV 104
Query: 433 ETILISVISML 465
TIL+ ++S +
Sbjct: 105 STILVGLVSFM 115
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 44.8 bits (101), Expect = 7e-06
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +1
Query: 274 YPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISV 453
YP PP++K + +I+HPNID G+VC++IL + W PV + +IL+ +
Sbjct: 80 YPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQD-------------WNPVLNLNSILVGL 126
Query: 454 ISMLADPN 477
+ PN
Sbjct: 127 QFLFLSPN 134
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.0 bits (99), Expect = 1e-05
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 420
+ P EYP + P + FV I+HPNID+ +G VC+ ++++ + E +LP
Sbjct: 53 VELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLP 108
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 42.3 bits (95), Expect = 4e-05
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 274 YPLRPPRMKFVTEIWHPNID-KNGDVCISILHEPGDDKWGYEKA 402
YP+ PP + F T+I HPNI NG+VC+ IL W + A
Sbjct: 64 YPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSA 107
Score = 31.9 bits (69), Expect = 0.052
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSA-GLIDDNDIYKWEVLIIGPPDTLYEGG 241
L K+ A + G + D D++ W+ +I GP +T YEGG
Sbjct: 8 LHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGG 52
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 30.3 bits (65), Expect = 0.16
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 479 SFGSASIEMTLISIVSTVCTGNH 411
SF +AS+ TLI+I ++ CTGN+
Sbjct: 63 SFSNASVYTTLITITNSQCTGNY 85
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 3.4
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYE 235
L+++ + KN GF +G+++D+ I ++ +G P Y+
Sbjct: 187 LERKPVGMAKNLRGGFGSGVLNDDGIEDQDIYDLGAPKMRYD 228
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 86 SEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYK 193
SEPQ L AEL N ++ F +DD ++Y+
Sbjct: 1780 SEPQEQYLSSSNYAELFSNQIQLF----VDDTNVYR 1811
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 25.4 bits (53), Expect = 4.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 99 DCGSDINYNCEIYPED 52
DCGS+ Y CEI E+
Sbjct: 65 DCGSNCGYECEITAEN 80
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.0 bits (52), Expect = 6.0
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 333 INIWMPYFSHKFHPGW 286
+N+W+ ++ FHP W
Sbjct: 306 VNLWIAHYWKDFHPRW 321
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 24.6 bits (51), Expect = 7.9
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -3
Query: 234 SYSVSGGPIMRTSHLYISLSSIKPAEKPST---GFLFSSANCFFNKSEDCGSDINYNCEI 64
++S++ ++ + YI + IK E L+ F+K++ INY+ E+
Sbjct: 2975 THSLANSFVLLANEFYIHNAKIKQKELEEIEEKNRLYRQREFNFDKNDYLKVFINYDDEV 3034
Query: 63 YPEDTKQMIFRQK 25
PE +++ +K
Sbjct: 3035 EPEVEPEVVIERK 3047
>SPAC1B3.10c |||SEL1 repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 680
Score = 24.6 bits (51), Expect = 7.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 195 HLYISLSSIKPAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPE 55
H I+L+ + E+ + F S + F E+CGS++ Y I+PE
Sbjct: 188 HNLIALNMPQSDEEAVKHYKFISDHLF---EEECGSNVTYLKCIWPE 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,126,488
Number of Sequences: 5004
Number of extensions: 44609
Number of successful extensions: 163
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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