Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30972X
(482 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 2e-33
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 99 9e-22
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 60 1e-09
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 58 5e-09
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 53 1e-07
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 44 7e-05
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 44 7e-05
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 44 9e-05
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 37 0.010
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 34 0.071
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 33 0.16
SB_31103| Best HMM Match : CC (HMM E-Value=8.3) 30 1.1
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 29 1.5
SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16) 27 6.1
SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14) 27 6.1
SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10) 27 8.1
SB_48766| Best HMM Match : DUF303 (HMM E-Value=3.1e-08) 27 8.1
SB_8158| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_3979| Best HMM Match : Syndecan (HMM E-Value=0.0017) 27 8.1
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 138 bits (335), Expect = 2e-33
Identities = 55/77 (71%), Positives = 70/77 (90%)
Frame = +1
Query: 250 STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHT 429
+++ FPKEYP RPP + F+++IWHPN+ KNG+VCISILHEPG+DK+GYEKA ERW P+HT
Sbjct: 384 ASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHT 443
Query: 430 VETILISVISMLADPND 480
VETI++SVISMLA+PND
Sbjct: 444 VETIMLSVISMLAEPND 460
Score = 79.8 bits (188), Expect = 1e-15
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +2
Query: 128 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPR 271
EL K PVEGFSAGL DD D+YKWE++++GPP T YE G+FKA +FP+
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPK 390
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 99 bits (238), Expect = 9e-22
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +1
Query: 235 GRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 414
G + + ++FP +YP PP +F+T++WHPNI ++GDVCISILH P DD E SERW
Sbjct: 1171 GGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERW 1230
Query: 415 LPVHTVETILISVISMLADPN 477
P V TIL+SVIS+L +PN
Sbjct: 1231 NPTQNVRTILLSVISLLNEPN 1251
Score = 60.9 bits (141), Expect = 5e-10
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPRN 274
L+ +L +L + PVEGF+ + D+++ ++W+V I GPP TLY GG+FKA FP +
Sbjct: 1129 LQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHD 1183
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
+ P+ YP PP+++FVT I+HPNID +G +C+ L P W P +
Sbjct: 19 IQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---------PKGMWKPALNIS 69
Query: 436 TILISVISMLADPN 477
++L +++ ++A+PN
Sbjct: 70 SVLSTILILMAEPN 83
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 57.6 bits (133), Expect = 5e-09
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +1
Query: 262 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 441
FP EYP +PP++ F T+I+HPNID+ G VC+ I+ + E W P E +
Sbjct: 48 FPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPII------------SPENWKPATKTEQV 95
Query: 442 LISVISMLADP 474
+ ++++++ DP
Sbjct: 96 IQALLALVHDP 106
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +1
Query: 277 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 456
P PP+++FVT I+HPNID +G +C+ L P W P + ++L +++
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---------PKGMWKPALNISSVLSTIL 90
Query: 457 SMLADPN 477
++A+PN
Sbjct: 91 ILMAEPN 97
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
++++L E+ +P SAG D D+Y+W I+GPP ++YEGG F
Sbjct: 140 IQRELTEITLDPPPNCSAGPKGD-DLYEWYSTILGPPGSVYEGGVF 184
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
++++L E+ +P SAG D D+Y+W I+GPP ++YEGG F
Sbjct: 100 IQRELTEITLDPPPNCSAGPKGD-DLYEWYSTILGPPGSVYEGGVF 144
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 43.6 bits (98), Expect = 9e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 388 GYEKASERWLPVHTVETILISVISMLA 468
GYE ++ERW PV +VE IL+SVISMLA
Sbjct: 2 GYESSAERWSPVQSVEKILLSVISMLA 28
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Frame = +1
Query: 235 GRFL*STLNFPKEYPLRPPRMKFVTE-----IWHPNIDKNGDVCISIL 363
G F + P +YP+RPPR+K +T ++PN+ +NG VC+SI+
Sbjct: 27 GGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSII 74
Score = 34.3 bits (75), Expect = 0.053
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2
Query: 173 DDNDIYKWEVLIIGPPDTLYEGGFF 247
D +DI K LI GP DT YEGGFF
Sbjct: 6 DKDDIPKIHALITGPFDTPYEGGFF 30
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 268 KEYPLRPPRMKFVTEIWHPNID-KNGDVCISILHE 369
++YP PP + V I+HPN+D +G VC+S+L +
Sbjct: 62 EDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLLDD 96
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 289 PRMKFVTEIWHPNIDKNGDVCISIL 363
PR F+T+I+HPN+ KNG++C++ L
Sbjct: 144 PRF-FLTKIFHPNVAKNGEICVNTL 167
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 35.5 bits (78), Expect = 0.023
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
L ++ EL +N E + A ++DN +++W + GPPDT + GG + I P
Sbjct: 15 LMREAKEL-RNATELYHAQPLEDN-LFEWHFTVRGPPDTEFAGGRYHGRIILP 65
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 265 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI-LHEPGDDKWGYEKASERWLPVHTVETI 441
P EYP++PP + +T I K +C+S+ H P E W P ++ T+
Sbjct: 65 PPEYPMKPPSIMLLTPNGRFEIGKK--ICLSMSAHHP-----------ETWQPSWSIRTV 111
Query: 442 LISVISML 465
L+++I +
Sbjct: 112 LMAIIGFM 119
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 33.9 bits (74), Expect = 0.071
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 158 SAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
SAG D +Y+W I+GPP ++YEGG F
Sbjct: 43 SAGPKGDK-LYEWYSTILGPPGSVYEGGVF 71
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 271 EYPLRPPRMKFVTEIWHPNIDKNGDVCISILHE 369
+YP P + T+I+HPN+D VC+S+L +
Sbjct: 63 DYPNVAPSINCKTKIYHPNMDGYDGVCMSLLDD 95
>SB_31103| Best HMM Match : CC (HMM E-Value=8.3)
Length = 93
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -2
Query: 364 EVLICRHHHFYQYLDAIFQSQISSGVVSKDIPWENLKCFKETSLV*CVWGTNNEDFPFVY 185
+VLI H H Y+ L ++ Q+ +G SK+ P+ N C + N D PF Y
Sbjct: 3 DVLIWAHEHSYEKLFRVYNQQMCNG--SKEAPYTN-PCAPVHIITGSAGCQENHD-PFKY 58
Query: 184 IIVIY*ASRKAFY 146
+ ASR Y
Sbjct: 59 HFGPWTASRSLDY 71
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 179 NDIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
+++++W + GPPDT + GG + I P
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILP 30
>SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -2
Query: 364 EVLICRHHHFYQYLDAIFQSQISSGVVSKDIPWENLKCFKETSLV*CVWGTNNEDFPFVY 185
+VLI H H Y+ L ++ Q+ +G SK+ P+ N C + N D PF Y
Sbjct: 3 DVLIWAHEHSYEKLFPVYNRQMCNG--SKEAPYTN-PCAPVHIITGSAGCQENHD-PFKY 58
Query: 184 IIVIY*ASRKAFY 146
+ ASR Y
Sbjct: 59 HFGPWTASRSLDY 71
>SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 71 QL*LMSEPQSSLLLKKQLAELNKNPVE-GFSAGLIDDNDIYKWEVLIIGPP 220
+L L+ P++S K+ NKN GF L DDND Y W V + PP
Sbjct: 212 ELPLLLPPRNS---SKRSRHDNKNITHYGFWLCLRDDNDDYHWTVENVIPP 259
>SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16)
Length = 558
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 219 QTHYTREVSLKHFKFSQGISFETTPDEI 302
+T T VSLK FK S S + TPD +
Sbjct: 296 ETPKTSNVSLKVFKLSSSPSIDLTPDPV 323
>SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14)
Length = 388
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 219 QTHYTREVSLKHFKFSQGISFETTPDEI 302
+T T VSLK FK S S + TPD +
Sbjct: 305 ETPKTSNVSLKVFKLSSSPSIDLTPDPV 332
>SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10)
Length = 779
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 194 ICIYHCHLLSQQKSLLLGFCSVQLIAFLIKAKTVA 90
+C++ C LL Q FC + L + IKA VA
Sbjct: 693 VCVHKCTLLMPQAITAKAFCYMSLASGSIKAFIVA 727
>SB_48766| Best HMM Match : DUF303 (HMM E-Value=3.1e-08)
Length = 198
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 174 SIKPAEKPSTGFLFSSA--NCFFNKSEDCGSDINYNCEIYPEDTKQMIFRQKMAGRVLS 4
+I+ A+ G++ +S+ N F + D G+ + I+P D + + FR +AGR ++
Sbjct: 100 AIRWAQTADQGYVPNSSMRNVFMAVAMDLGNATSPYGSIHPTDKRDVGFRLALAGRAIA 158
>SB_8158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 10 NSASHLLSKNHLFRVFRVNFTIVINVRATVFAFIKKAIS*TEQKPSRRLF 159
+ A + +KN +F + ++I T+F F KAI TE K SR++F
Sbjct: 255 DQACWIANKNANLCIFGLPVALMILFNFTLFIFTVKAIRVTE-KQSRKIF 303
>SB_3979| Best HMM Match : Syndecan (HMM E-Value=0.0017)
Length = 436
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/41 (21%), Positives = 25/41 (60%)
Frame = -1
Query: 164 QQKSLLLGFCSVQLIAFLIKAKTVALTLITIVKFTLKTRNK 42
+++ +L GF +++++ L+ ++ L+ + + LK RN+
Sbjct: 325 EKRKVLFGFVTLEILIALLAGALFSVLLVAFLVYRLKKRNE 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,555
Number of Sequences: 59808
Number of extensions: 318910
Number of successful extensions: 825
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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