Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30972X
(482 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 148 2e-36
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 110 4e-25
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 108 2e-24
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 70 1e-12
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 70 1e-12
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 60 8e-10
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 58 3e-09
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 58 3e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 56 2e-08
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 50 9e-07
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 46 1e-05
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 46 1e-05
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 46 1e-05
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 44 6e-05
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 42 2e-04
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 42 3e-04
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 42 3e-04
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 41 5e-04
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 40 0.001
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 37 0.007
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 36 0.012
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 36 0.012
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 33 0.082
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical ... 29 1.8
Z80223-8|CAN99671.1| 177|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 28 3.1
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 28 4.1
AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine r... 27 7.1
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.4
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 27 9.4
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 148 bits (358), Expect = 2e-36
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +1
Query: 217 PRHTIRGRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 396
P G F + L+FP++YP +PP+MKF++EIWHPNIDK G+VCISILH+PGDDKWGYE
Sbjct: 44 PDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYE 103
Query: 397 KASERWLPVHTVETILISVISMLADPN 477
+ ERWLPVHTVETIL+SVISML DPN
Sbjct: 104 RPEERWLPVHTVETILLSVISMLTDPN 130
Score = 109 bits (262), Expect = 1e-24
Identities = 48/60 (80%), Positives = 56/60 (93%)
Frame = +2
Query: 95 QSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPRN 274
QSSLLLKKQLA++ + PV+GFSAGL+DDNDIYKWEVL+IGPPDTLYEGGFFKA+ FPR+
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRD 62
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 110 bits (265), Expect = 4e-25
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
+ FP++YPL PP+M+F I+HPNI +G VCISILH PGDD GYE ++ERW PV ++E
Sbjct: 58 ITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIE 117
Query: 436 TILISVISMLADPND 480
IL+SV+SMLA+PND
Sbjct: 118 KILLSVVSMLAEPND 132
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPRN 274
L + EL P EG A ID+++ ++WE LI GP +T + G F A FP++
Sbjct: 9 LMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQD 63
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 108 bits (260), Expect = 2e-24
Identities = 46/90 (51%), Positives = 61/90 (67%)
Frame = +1
Query: 208 YWSPRHTIRGRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKW 387
Y P+ +G + +++ FP YP PP MKF T++WHPN+ +NGD+CISILH P DD
Sbjct: 47 YGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQ 106
Query: 388 GYEKASERWLPVHTVETILISVISMLADPN 477
E A ERW P +V TIL+SVIS+L +PN
Sbjct: 107 SGELACERWNPTQSVRTILLSVISLLNEPN 136
Score = 56.8 bits (131), Expect = 8e-09
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPRN 274
L +L L PVEGF+ + +DN ++ W V I GPP TLY+GG+FKA FP N
Sbjct: 15 LTMELKNLQSQPVEGFTIDVNEDN-LFVWTVGIYGPPKTLYQGGYFKASIRFPSN 68
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1
Query: 217 PRHTIRGRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 396
P +G T++FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 41 PESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---------- 90
Query: 397 KASERWLPVHTVETILISVISMLADPN 477
+W P T+ +L+S+ S+L DPN
Sbjct: 91 ---SQWSPALTISKVLLSICSLLCDPN 114
Score = 46.0 bits (104), Expect = 1e-05
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F FP
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFP 57
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1
Query: 217 PRHTIRGRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 396
P +G T++FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 41 PESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---------- 90
Query: 397 KASERWLPVHTVETILISVISMLADPN 477
+W P T+ +L+S+ S+L DPN
Sbjct: 91 ---SQWSPALTISKVLLSICSLLCDPN 114
Score = 46.0 bits (104), Expect = 1e-05
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F FP
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFP 57
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 60.1 bits (139), Expect = 8e-10
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P +
Sbjct: 57 LFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIR 103
Query: 436 TILISVISMLADPN 477
T+L+S+ ++L+ PN
Sbjct: 104 TVLLSIQALLSAPN 117
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 432
+L F +EYP +PP +KF+++++HPN+ +G +C+ IL RW P + V
Sbjct: 56 SLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDV 102
Query: 433 ETILISVISMLADPN 477
IL S+ S+L +PN
Sbjct: 103 AAILTSIQSLLDEPN 117
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 250
L + +L ++P G S +DN I WE +I GP +T +E G FK
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFK 54
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 432
+L F +EYP +PP +KF+++++HPN+ +G +C+ IL RW P + V
Sbjct: 56 SLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDV 102
Query: 433 ETILISVISMLADPN 477
IL S+ S+L +PN
Sbjct: 103 AAILTSIQSLLDEPN 117
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 250
L + +L ++P G S +DN I WE +I GP +T +E G FK
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFK 54
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
+ P EY PP +K +T++WHPNI+++G +C+SIL + D++G+ VH
Sbjct: 81 ITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHG-- 138
Query: 436 TILISVISMLADPND 480
L+S+ + L D ND
Sbjct: 139 --LVSLFNDLMDFND 151
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 55.6 bits (128), Expect = 2e-08
Identities = 22/73 (30%), Positives = 43/73 (58%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
+ FP +YP +PP++ F T+I+HPN+D+ G C+ I+ +E W P E
Sbjct: 55 ITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIV------------TAENWKPATKTE 102
Query: 436 TILISVISMLADP 474
++++++S++ +P
Sbjct: 103 QVMMALLSLINEP 115
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
L+K+L +L V+ + ++ ++ KW VL+I P Y G FK FP
Sbjct: 7 LQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFP 58
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 50.0 bits (114), Expect = 9e-07
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 432
+ P +YP PP +KF T+IWHPN+ + G +C+ IL ++W T+
Sbjct: 60 IKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL-------------KDQWAASLTL 106
Query: 433 ETILISVISMLADP 474
T+L+S+ +++ P
Sbjct: 107 RTVLLSIQALMCTP 120
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +1
Query: 262 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 441
F ++P PP+ KF ++HPN+ +G VC+S+L E D W P +++ +
Sbjct: 64 FKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQL 112
Query: 442 LISVISMLADPN 477
LI + +L PN
Sbjct: 113 LIGIQDLLNHPN 124
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 182 DIYKWEVLIIGPPDTLYEGGFFKAL*IF 265
+++ WE I G DT++EGG ++ +F
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLF 64
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +1
Query: 262 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 441
F ++P PP+ KF ++HPN+ +G VC+S+L E D W P +++ +
Sbjct: 64 FKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQL 112
Query: 442 LISVISMLADPN 477
LI + +L PN
Sbjct: 113 LIGIQDLLNHPN 124
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 182 DIYKWEVLIIGPPDTLYEGGFFKAL*IF 265
+++ WE I G DT++EGG ++ +F
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLF 64
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
++K+L +L ++P S G + D D+Y W+ I+GPP++ Y+GG F
Sbjct: 6 IQKELHDLGRDPPAQCSTGSVGD-DLYHWQATIMGPPESPYQGGIF 50
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVHT 429
TL+ EYP +PP +KF ++HPN+D ++C +L E W P T
Sbjct: 65 TLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPML------------LQENWKPETT 112
Query: 430 VETILISVISMLADPN 477
+E +L+++I +L +P+
Sbjct: 113 MEDVLLNLIVLLNEPD 128
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPRN 274
LKK L K PV A ++ N I +W +IIG P T YEGG + +FP++
Sbjct: 13 LKKDYQRLLKEPVPFMKAAPLETN-ILEWRYIIIGAPKTPYEGGIYMGKLLFPKD 66
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +1
Query: 214 SPRHTIRGRFL*STLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 393
+P+ G L FPK++P +PP + +T + N +C+SI
Sbjct: 47 APKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI----------S 94
Query: 394 EKASERWLPVHTVETILISVISMLAD 471
+ + W P TV TI+ ++S + D
Sbjct: 95 DYHPDTWNPAWTVSTIITGLMSFMND 120
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 262 FPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 435
F +YP P + FV E HP+I NG +C+SIL S+ W P +V+
Sbjct: 61 FGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSIL-------------SDDWTPALSVQ 107
Query: 436 TILISVISMLADPND 480
++ +S++SML+ +
Sbjct: 108 SVCLSILSMLSSSKE 122
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSA-GLIDDNDIYKWEVLIIGPPDTLYEGGFF 247
L K+LA+L EG ND+ +W++ ++G TLY G F
Sbjct: 9 LMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVF 55
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 420
++ P +YP + P + F+ +I+HPNID+ +G VC+ ++++ + + +LP
Sbjct: 56 VDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYDLTNIFDTFLP 111
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFPRN 274
L+K A+L ++PV+G A L ++++I +W + G PDT + GG++ IF N
Sbjct: 24 LQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKEN 77
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 40.7 bits (91), Expect = 5e-04
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Frame = +1
Query: 256 LNFPKEYPLRPPRM---------------KFVTEIWHPNI-DKNGDVCISILHEPGDDKW 387
++ P+ YP PP++ KFVT IWHPNI + G +C+ IL
Sbjct: 74 VDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDIL-------- 125
Query: 388 GYEKASERWLPVHTVETILISVISMLADP 474
++W T+ T+L+S+ +ML P
Sbjct: 126 -----KDKWTASLTLRTVLLSLQAMLCSP 149
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 268 KEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKW 387
+ YP + P +KF+T+IWHP++ +G +C LH+ + W
Sbjct: 406 ESYPFKAPTVKFITKIWHPSVSPFDGTIC---LHDVDNGVW 443
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +1
Query: 262 FPKEYPLRPPRMKFVTE-----IWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVH 426
FP YP PP+ F+T ++PN+ +G +C+SIL W + E+W P
Sbjct: 468 FPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL-----GTW-EGRPEEKWNPYC 521
Query: 427 TVETILISV 453
++ +L+S+
Sbjct: 522 SLMQVLVSI 530
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +1
Query: 262 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 441
FP +YP++PP + +T + + N VC+SI GY E WLP ++ T
Sbjct: 64 FPADYPMKPPNLILLTP--NGRFELNKKVCLSIS--------GYH--PETWLPSWSIRTA 111
Query: 442 LISVISML 465
L+++I L
Sbjct: 112 LLALIGFL 119
Score = 33.5 bits (73), Expect = 0.082
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 110 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAL*IFP 268
L K+ EL + P E + A ++DN +++W I G T +EGG + IFP
Sbjct: 15 LMKEAMEL-RQPTEMYHAQPMEDN-LFEWHFTIRGTLGTDFEGGIYHGRIIFP 65
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 253 TLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWL 417
++NF K +P+ PP +F T + HPN+D G + + +L + + W E + ++ L
Sbjct: 91 SVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ---EHWSSETSLKKLL 141
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 33.5 bits (73), Expect = 0.082
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 80 LMSEPQSSLLLKKQLAELNKNPVEG-FSAGLIDDND--IYKWEVLIIGPPDTLYEGGFF 247
++ P++ LL+ +L E K +G S GL DD+D + +W IIGPP T YE +
Sbjct: 1 MVDVPRNFRLLE-ELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIY 58
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 30.7 bits (66), Expect = 0.58
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 183 SLSSIKPAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMI 37
SL + ++P+ GFL + AN NK+++ GS I I P + I
Sbjct: 1100 SLPGSRMLKRPNFGFLSNIANDAINKAKEAGSQIQAAVPIKPSSSSSNI 1148
>AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical
protein K07E8.10 protein.
Length = 155
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 246 KKPPSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSANC-FFNKS 103
+ PP +S PIM Y S I + PST + SS+N F+KS
Sbjct: 104 QNPPKIVLSKRPIMDCQQFYQSSEDIDEEQVPSTSNVQSSSNAPSFSKS 152
>Z80223-8|CAN99671.1| 177|Caenorhabditis elegans Hypothetical
protein F26D10.9b protein.
Length = 177
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 165 PAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMIFRQ 28
PA K GF + A FF +S+D NYN + E++ I+R+
Sbjct: 17 PAGKDHHGFSGNDAPIFFPESDDKLELDNYNTQFETENSALKIYRK 62
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 165 PAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMIFRQ 28
PA K GF + A FF +S+D NYN + E++ I+R+
Sbjct: 453 PAGKDHHGFSGNDAPIFFPESDDKLELDNYNTQFETENSALKIYRK 498
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 237 PSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSANC-FFNKSEDCGSDINYNCEIY 61
PS+S GP H++ +S P+ P+ F+ S+ ++ + D ++ Y +
Sbjct: 499 PSHSSHSGPAQAPQHIHFESASSTPSTPPAFHFIPPSSEAPYYVEINDADTETVYVSSVT 558
Query: 60 P 58
P
Sbjct: 559 P 559
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 256 LNFPKEYPLRPPRMKFVTEIWH 321
L FP YP P++KF T IW+
Sbjct: 52 LTFPDNYPNALPQIKFQTLIWN 73
>AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine
receptor, class z protein19 protein.
Length = 334
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -1
Query: 155 SLLLGFCSVQLIAFLIKAKTVALTLITIVKFTL 57
++++ FCSV ++ L +A + L L+ + +FT+
Sbjct: 109 TIVMWFCSVTVLVGLTEAFNILLFLLAVSRFTI 141
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 308 LKYGIQILIKMVMSAYQYFTSQVMTNGVMKK 400
L I LI++V +Y YFT +++ ++KK
Sbjct: 459 LGLSILSLIQLVTYSYTYFTKKIVNERILKK 489
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 308 LKYGIQILIKMVMSAYQYFTSQVMTNGVMKK 400
L I LI++V +Y YFT +++ ++KK
Sbjct: 459 LGLSILSLIQLVTYSYTYFTKKIVNERILKK 489
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 135 FSSANCFFNKSEDCGSDINYNCEIYPEDT--KQMIFRQKMAGRVLSR 1
F ++C ++ E C + Y+C+ Y T KQM F ++ L R
Sbjct: 160 FRLSSCIDDEIEPCENFYRYSCQRYHSQTADKQMSFLSQLKDESLRR 206
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 135 FSSANCFFNKSEDCGSDINYNCEIYPEDT--KQMIFRQKMAGRVLSR 1
F ++C ++ E C + Y+C+ Y T KQM F ++ L R
Sbjct: 244 FRLSSCIDDEIEPCENFYRYSCQRYHSQTADKQMSFLSQLKDESLRR 290
>AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical
protein Y67A10A.9 protein.
Length = 734
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 185 YHCHLLSQQKSLLLGFCSV 129
++CHLL +LLLGFCS+
Sbjct: 215 FYCHLLG---TLLLGFCSI 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,764,410
Number of Sequences: 27780
Number of extensions: 248294
Number of successful extensions: 723
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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