Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30969
(690 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 23 3.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 9.5
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 349 IVIWVLDKSMQVQNLKENGLVIL 417
I IW QV+NL +NG ++
Sbjct: 443 IQIWTTGSDPQVRNLLDNGYRVI 465
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -3
Query: 646 FEGSHLDSSFATWYTNGSEI 587
F+ H D F +W +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -3
Query: 646 FEGSHLDSSFATWYTNGSEI 587
F+ H D F +W +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -3
Query: 646 FEGSHLDSSFATWYTNGSEI 587
F+ H D F +W +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -3
Query: 646 FEGSHLDSSFATWYTNGSEI 587
F+ H D F +W +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -3
Query: 646 FEGSHLDSSFATWYTNGSEI 587
F+ H D F +W +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 460 FEILPTIFLRKGLCYYHMW 516
FE P +FL + + H W
Sbjct: 447 FESPPVVFLNDFISHQHAW 465
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 460 FEILPTIFLRKGLCYYHMW 516
FE P +FL + + H W
Sbjct: 447 FESPPVVFLNDFISHQHAW 465
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 460 FEILPTIFLRKGLCYYHMW 516
FE P +FL + + H W
Sbjct: 447 FESPPVVFLNDFISHQHAW 465
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 460 FEILPTIFLRKGLCYYHMW 516
FE P +FL + + H W
Sbjct: 447 FESPPVVFLNDFISHQHAW 465
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.0 bits (42), Expect = 9.5
Identities = 11/53 (20%), Positives = 20/53 (37%)
Frame = -3
Query: 304 FNRVDFHSTIITKHLNRKQSYKLQNKVLVITCIFQLRLTNNYSN*IEEVKKFQ 146
F+R + H I+ Y V+V+T ++ R +E K +
Sbjct: 56 FHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIK 108
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,609
Number of Sequences: 336
Number of extensions: 3588
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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