Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30969
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.74 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   6.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.1  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 22/82 (26%), Positives = 33/82 (40%)
 Frame = +1

Query: 322  NIMFVFLNCIVIWVLDKSMQVQNLKENGLVILKHITFM*INNNVCNFEILPTIFLRKGLC 501
            +I  V L C++ W++   M VQ      L   K+   +  N      EI+P +   K   
Sbjct: 1433 SIFNVLLVCLIFWLIFAIMGVQ------LFAGKYFKCVDKNKTTLPHEIIPDVNACKAEN 1486

Query: 502  YYHMWTKSGHNLDSTILGFMCL 567
            Y   W  S  N D     ++CL
Sbjct: 1487 Y--SWENSPMNFDHVGKAYLCL 1506


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 158 QEISRFSLKNYFISWKYKDPCFV 90
           +E+ R  L + F+S+ +KD  F+
Sbjct: 889 EELDRDKLYDAFVSYSHKDEAFI 911


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 674 VRTLISYIVFRRITSRFQFCN 612
           VR  +SY+ F+   S+ QFC+
Sbjct: 253 VRHAVSYVDFQDGASQLQFCS 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,900
Number of Sequences: 2352
Number of extensions: 14310
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)