Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30966
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   0.86 
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   3.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   3.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 502 STYFWSTINFEICTEGSIL 558
           ST +W T+ F +C E  ++
Sbjct: 397 STVYWFTVEFGLCKESGVV 415


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 484 IFLFAFACRRVHVPSHGESLPSPMD 410
           +FL A AC + +V S    +P  +D
Sbjct: 5   VFLLALACLKTYVSSQEYLVPQNID 29


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 484 IFLFAFACRRVHVPSHGESLPSPMD 410
           +FL A AC + +V S    +P  +D
Sbjct: 5   VFLLALACLKTYVSSQEYLVPQNID 29


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 432 SRYHRPWTSAMPGPEP-SRCLPK 367
           SR H+P T + P P P SR  P+
Sbjct: 247 SRSHQPATKSKPRPAPASRNAPE 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,428
Number of Sequences: 336
Number of extensions: 3244
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)