Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30966
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0291 + 3010685-3010838,3010954-3011489                           28   7.0  
01_05_0747 - 24857965-24858393,24858502-24860063,24860176-24860245     28   7.0  
10_01_0288 - 2992107-2992627,2992742-2992895                           28   9.2  
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126...    28   9.2  

>10_01_0291 + 3010685-3010838,3010954-3011489
          Length = 229

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 480 FYLPLHADEYTSHLMVSRYHRPWTSAMPGPEPSRCLP 370
           F +PL AD ++S   V++ H       PG EPS+ +P
Sbjct: 80  FSIPLDADLHSSDC-VAQLHGATNEPCPGQEPSKIVP 115


>01_05_0747 - 24857965-24858393,24858502-24860063,24860176-24860245
          Length = 686

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +2

Query: 554 YLCQCNFIFNLVHSTFEQYSNLLFTF*FSILRNCFLKLFLIENVPKVLTNVFHG 715
           YL +  F F  V   F  Y  +   F F+    C   LFL++ VP+ +T V HG
Sbjct: 362 YLLKVVFYFEAVRREF--YHPIRANFFFAPWIAC---LFLVQGVPRPVTEVHHG 410


>10_01_0288 - 2992107-2992627,2992742-2992895
          Length = 224

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 480 FYLPLHADEYTSHLMVSRYHRPWTSAMPGPEPSRCLP 370
           F +PL AD ++S   +++ H       PG EPS+ +P
Sbjct: 80  FSVPLDADLHSSDC-IAQLHSATNEPCPGQEPSKIVP 115


>01_07_0238 +
           42209407-42209964,42210039-42210561,42212577-42212665,
           42212981-42213191,42213265-42213446,42213573-42213812,
           42214691-42214878,42215230-42215323,42215407-42215463,
           42215552-42215686,42216460-42216525,42216745-42216858,
           42217849-42218010,42218093-42218221,42218323-42218424,
           42219428-42219504,42219600-42219957
          Length = 1094

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 412 PWAMVATHHEMGRVLVCMQRQIKK 483
           PW+ V  HH  G+V++ M+  I+K
Sbjct: 904 PWSSVTKHHFKGKVVLIMEILIRK 927


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,034,602
Number of Sequences: 37544
Number of extensions: 294909
Number of successful extensions: 559
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)