Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30965X
(573 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B45BA Cluster: PREDICTED: similar to ENSANGP000... 54 3e-06
UniRef50_Q3IZA1 Cluster: Arginine utilization protein RocB; n=2;... 36 0.89
UniRef50_Q9LV35 Cluster: WD40-repeat protein; n=8; Magnoliophyta... 34 2.7
UniRef50_UPI0000D5760F Cluster: PREDICTED: similar to CG6454-PA,... 33 4.8
UniRef50_Q0SCB2 Cluster: Multidrug resistance transporter, MFS s... 33 6.3
UniRef50_Q75LV2 Cluster: Expressed protein; n=1; Oryza sativa (j... 33 6.3
UniRef50_Q55PB3 Cluster: Putative uncharacterized protein; n=2; ... 33 6.3
UniRef50_Q4SQB4 Cluster: Chromosome 4 SCAF14533, whole genome sh... 32 8.3
UniRef50_Q9AQG4 Cluster: CelE; n=2; Caldicellulosiruptor sp. Tok... 32 8.3
UniRef50_A6GD15 Cluster: Molybdopterin dehydrogenase, FAD-bindin... 32 8.3
UniRef50_Q00VW8 Cluster: Chromosome 14 contig 1, DNA sequence; n... 32 8.3
>UniRef50_UPI00015B45BA Cluster: PREDICTED: similar to
ENSANGP00000027469, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
ENSANGP00000027469, partial - Nasonia vitripennis
Length = 758
Score = 53.6 bits (123), Expect = 3e-06
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 137 NGCIALKAPTFHWEPQHCGEIKDFICEQTRCYYYNYGSI 253
N C+A+ +P W C +K+FICEQ+R Y+YNYGSI
Sbjct: 635 NSCMAMSSPNLMWSTVDCMLLKNFICEQSRSYHYNYGSI 673
>UniRef50_Q3IZA1 Cluster: Arginine utilization protein RocB; n=2;
Rhodobacter sphaeroides|Rep: Arginine utilization
protein RocB - Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 536
Score = 35.5 bits (78), Expect = 0.89
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -1
Query: 537 LLVLVVIAGIPSAARE*WESICGGDLNKALVLRCADWRPSREEGR 403
LLV ++AG+P+ A + +E + G + ALV R A+W P +G+
Sbjct: 225 LLVTALVAGVPAHASQPYEGLNAGAIAAALVAR-AEWAPELADGQ 268
>UniRef50_Q9LV35 Cluster: WD40-repeat protein; n=8;
Magnoliophyta|Rep: WD40-repeat protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 609
Score = 33.9 bits (74), Expect = 2.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 207 KSLISPQCWGSQWKVGAFSAMHPLVMTCSVLEYRPCRAVRCG 82
KSL+ W S VG F V++C++ RP R V CG
Sbjct: 123 KSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCG 164
>UniRef50_UPI0000D5760F Cluster: PREDICTED: similar to CG6454-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG6454-PA, isoform A - Tribolium castaneum
Length = 1525
Score = 33.1 bits (72), Expect = 4.8
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 369 PTSTLIISSASYDLLPL-MASSLHTS-RLAPCSNPHRKLTPTIRELRTVFPRSRPGPEGR 542
P+ST++ + ++ AS+++T C+N H LTP++R + P P P
Sbjct: 792 PSSTILTCTNDNNVTECDTASAVNTEIDRGTCNNMHASLTPSLRNNSSPIPEHLPEPGHH 851
Query: 543 THSGSGTKMM 572
GTKM+
Sbjct: 852 RAESVGTKMV 861
>UniRef50_Q0SCB2 Cluster: Multidrug resistance transporter, MFS
superfamily protein; n=2; Actinomycetales|Rep: Multidrug
resistance transporter, MFS superfamily protein -
Rhodococcus sp. (strain RHA1)
Length = 478
Score = 32.7 bits (71), Expect = 6.3
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = -1
Query: 183 WGSQWKVGAFSAMHPLVMTCSVLEYRP------CRAVRCGAVLPCGTSRGSMLSSACWAG 22
WGS W +G F+ L+ S++E R R +R G VL S L +A + G
Sbjct: 226 WGSPWTLGFFAGAATLLTAWSLVELRTPYPLINLRVLRNGDVL-VANSTAIGLGAAMYIG 284
Query: 21 ASMGSL 4
S+GSL
Sbjct: 285 LSIGSL 290
>UniRef50_Q75LV2 Cluster: Expressed protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice)
Length = 181
Score = 32.7 bits (71), Expect = 6.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 435 HTSRLAPCSNPHRKLTPTIRELRTVFPRSRPGPEGRTHSGS 557
H L C +P R L P + + R PR+ PG GR H S
Sbjct: 109 HRHGLLRCRHPRRPLHPPLPQPRRGPPRAHPGALGRNHPPS 149
>UniRef50_Q55PB3 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1024
Score = 32.7 bits (71), Expect = 6.3
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +2
Query: 17 DAPAQHADDSMDPLDVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAPTF---HWEPQH 187
D P PL ST+PQR A T V + + + +P+ H EP+
Sbjct: 211 DIPRAANQTKRRPLSYSSTSTSPQRFATPKAADDTAAVASRRAMGMTSPSDRADHREPES 270
Query: 188 CGEIKDFICEQTRC 229
+I+D++ Q++C
Sbjct: 271 ESQIEDYLRRQSKC 284
>UniRef50_Q4SQB4 Cluster: Chromosome 4 SCAF14533, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 4
SCAF14533, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2359
Score = 32.3 bits (70), Expect = 8.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 143 CIALKAPTFHWEPQHCGEIKDFICEQTRCYY 235
C+ + T HW C E+ FIC+ + +Y
Sbjct: 1250 CVEMLHQTGHWNDVSCSELNTFICKMPKAHY 1280
>UniRef50_Q9AQG4 Cluster: CelE; n=2; Caldicellulosiruptor sp.
Tok7B.1|Rep: CelE - Caldicellulosiruptor sp. Tok7B.1
Length = 1751
Score = 32.3 bits (70), Expect = 8.3
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3
Query: 438 TSRLAPCSNPHRKLTPTIRELRTVFPRSRPGPEGRTHSGSGTKMM 572
TS AP S P TPT T P P P G +GSG K++
Sbjct: 638 TSTPAPTSTPTPTPTPTPTVTATPTPTPTPTPTGSPGTGSGVKVL 682
>UniRef50_A6GD15 Cluster: Molybdopterin dehydrogenase, FAD-binding
protein; n=1; Plesiocystis pacifica SIR-1|Rep:
Molybdopterin dehydrogenase, FAD-binding protein -
Plesiocystis pacifica SIR-1
Length = 325
Score = 32.3 bits (70), Expect = 8.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 191 GEIKDFICEQTRCYYYNYGSIPFHPRRGNARK 286
G + +C++TRC+YY +P P++GNA +
Sbjct: 102 GTMGGVLCQRTRCWYYRSRHMPC-PKKGNAER 132
>UniRef50_Q00VW8 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 130
Score = 32.3 bits (70), Expect = 8.3
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 429 SLHTSRLAPCSNPHRKLTPTIRELRTVFPRSRPGPE 536
S+ R + CS+PH + P R LRT PRS P P+
Sbjct: 85 SMTVVRRSTCSHPHARPCPRARALRTTDPRS-PHPQ 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,944,592
Number of Sequences: 1657284
Number of extensions: 11359941
Number of successful extensions: 34150
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 32815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34136
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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