Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30965X
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2483|AAF57852.1|  194|Drosophila melanogaster CG18431-P...    87   2e-17
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d...    30   1.9  
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA...    29   5.9  

>AE013599-2483|AAF57852.1|  194|Drosophila melanogaster CG18431-PA,
           isoform A protein.
          Length = 194

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 41/76 (53%), Positives = 49/76 (64%)
 Frame = +2

Query: 47  MDPLDVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAPTFHWEPQHCGEIKDFICEQTR 226
           +DP+D    +T+PQRTAR    S  E     GC+ LK PT  W P+ C  +KDFICEQTR
Sbjct: 125 LDPVD-HNSNTSPQRTARDSS-SGAE----KGCVILKQPTLKWMPEDCSAVKDFICEQTR 178

Query: 227 CYYYNYGSIPFHPRRG 274
           CYYYNYGSIP    +G
Sbjct: 179 CYYYNYGSIPVSSAQG 194


>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
            protein protein.
          Length = 2895

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 32   HADDSMDPLDVPQGSTAPQRTARHGRYSRTEHVMTNGCIA 151
            +AD  M    +P GS   Q T RH  ++R+E  +T GC A
Sbjct: 1999 NADVQMSASSMPSGS---QGTRRHAFFARSESTLTLGCSA 2035


>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
            protein.
          Length = 2885

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 32   HADDSMDPLDVPQGSTAPQRTARHGRYSRTEHVMTNGCIA 151
            +AD  M    +P GS   Q T RH  ++R+E  ++ GC A
Sbjct: 2006 NADVQMSASSMPSGS---QGTRRHAFFARSESTLSLGCSA 2042


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,210,339
Number of Sequences: 53049
Number of extensions: 536778
Number of successful extensions: 1372
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)