Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30965X
         (573 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-9|CAI79191.1|  400|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z81542-8|CAB04417.2|  402|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin...    29   3.1  
Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical pr...    28   4.1  

>Z81542-9|CAI79191.1|  400|Caenorhabditis elegans Hypothetical
           protein F49A5.5b protein.
          Length = 400

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
 Frame = +2

Query: 59  DVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRC 229
           DV  G+T+       G Y      M  GCI  K        W    C EI  F+CE    
Sbjct: 221 DVKSGTTSAYNNFADG-YPNN---MAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPAT 276

Query: 230 YY-----YNYGSIPFHP 265
            Y     YNY +  + P
Sbjct: 277 IYDSTCKYNYNNYCYTP 293


>Z81542-8|CAB04417.2|  402|Caenorhabditis elegans Hypothetical
           protein F49A5.5a protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
 Frame = +2

Query: 59  DVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRC 229
           DV  G+T+       G Y      M  GCI  K        W    C EI  F+CE    
Sbjct: 223 DVKSGTTSAYNNFADG-YPNN---MAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPAT 278

Query: 230 YY-----YNYGSIPFHP 265
            Y     YNY +  + P
Sbjct: 279 IYDSTCKYNYNNYCYTP 295


>AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin
           protein 3 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
 Frame = +2

Query: 92  TARHGRYSRTEHVMTNG-CIALKAPTFHWEPQHCGEIKDFICEQTRCY----YYNYGS 250
           TA +  +S     +T G C+  +  +  W    C E + ++CE    +    YYNY +
Sbjct: 101 TAAYDNFSPGNPKVTTGSCVYFETSSGRWLSAPCTEPRSYVCETPSTHEDPCYYNYNN 158


>Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical
           protein F35C5.8 protein.
          Length = 372

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = +2

Query: 137 NGCIA---LKAPTFHWEPQHCGEIKDFICEQTRCYYYNY 244
           N C+A       T  W P  C     FICEQ  C   NY
Sbjct: 330 NACVADMKYSDGTTAWTPVSCANNFRFICEQVACDTDNY 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,739,043
Number of Sequences: 27780
Number of extensions: 256172
Number of successful extensions: 678
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)