Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30963
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 8e-27
SB_57871| Best HMM Match : RVT_1 (HMM E-Value=0.0029) 34 0.10
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 34 0.10
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 34 0.10
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 34 0.10
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 34 0.10
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 34 0.10
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 34 0.10
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 34 0.10
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 34 0.10
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 33 0.18
SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16) 33 0.18
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 33 0.18
SB_15141| Best HMM Match : RVT_1 (HMM E-Value=1.1) 33 0.18
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 33 0.18
SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05) 33 0.24
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 31 0.72
SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 31 0.72
SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 31 1.3
SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 31 1.3
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07) 31 1.3
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 31 1.3
SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 31 1.3
SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3) 31 1.3
SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 31 1.3
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 31 1.3
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 31 1.3
SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 31 1.3
SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 31 1.3
SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07) 31 1.3
SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) 31 1.3
SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11) 31 1.3
SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21) 30 1.7
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_20450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66) 29 3.8
SB_1136| Best HMM Match : HC2 (HMM E-Value=4.2) 29 3.8
SB_25300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022) 28 6.7
SB_56521| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
>SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 117 bits (282), Expect = 8e-27
Identities = 63/127 (49%), Positives = 81/127 (63%), Gaps = 10/127 (7%)
Frame = +1
Query: 157 PRWSVLWQFSKLPN*SGSKTQRR*NSINEQRIHEHESRRISDHFIEKAVAEA-------- 312
P S F P + +K ++ +EH SR+I+D FI++AV EA
Sbjct: 212 PGGSCFGSFQPCPTKAEAKRSAAKIALMNSVFNEHPSRKITDDFIDQAVHEAQGTEAKVA 271
Query: 313 --RASFAGDTSNPHQDPSAGIAAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRE 486
R + + +PH +P+ G+ AFRFMLEANKGRTMLEFQELMT+FQLLHWNGSL+AMR+
Sbjct: 272 AKRRTMSLKPQDPH-NPNTGVGAFRFMLEANKGRTMLEFQELMTIFQLLHWNGSLKAMRD 330
Query: 487 RQCSRQE 507
R CSRQE
Sbjct: 331 RNCSRQE 337
Score = 108 bits (260), Expect = 4e-24
Identities = 50/77 (64%), Positives = 57/77 (74%)
Frame = +2
Query: 23 VNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTK 202
VNV++AL+EFW +K V YE A PPYVC+VTLPGG+CFGSFQ CPTK
Sbjct: 167 VNVIDALEEFWNMKKAKGAKFKTGDCVSYEPGSAEKPPYVCFVTLPGGSCFGSFQPCPTK 226
Query: 203 AEARRSAAKIALMNSVF 253
AEA+RSAAKIALMNSVF
Sbjct: 227 AEAKRSAAKIALMNSVF 243
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 513 AHYSARALDDAMREQMAREWATREREGLRPVAEYYARSWRDL 638
AHY+ R +DD MR QMA +W +RE+E +AE +R+ +L
Sbjct: 340 AHYNERIIDDDMRSQMALDWISREQEQPGLIAEELSRATNEL 381
>SB_57871| Best HMM Match : RVT_1 (HMM E-Value=0.0029)
Length = 195
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 11 PRRTVDLSPLNKYCQRETYATESPFQLARRIANDTWKTVTDAWNGYHSVPLRSSDRHLTT 70
Query: 371 AIPALGSW 348
I G W
Sbjct: 71 FITLFGRW 78
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 318 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 377
Query: 371 AIPALGSW 348
I G W
Sbjct: 378 FITPFGRW 385
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 666 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 725
Query: 371 AIPALGSW 348
I G W
Sbjct: 726 FITPFGRW 733
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 634 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 693
Query: 371 AIPALGSW 348
I G W
Sbjct: 694 FITPFGRW 701
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 371 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 430
Query: 371 AIPALGSW 348
I G W
Sbjct: 431 FITPFGRW 438
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 668 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 727
Query: 371 AIPALGSW 348
I G W
Sbjct: 728 FITPFGRW 735
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 654 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 713
Query: 371 AIPALGSW 348
I G W
Sbjct: 714 FITPFGRW 721
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 726 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 785
Query: 371 AIPALGSW 348
I G W
Sbjct: 786 FITPFGRW 793
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 223 PRRTVDLSPLNKYCQRETYATESPFQLARRILNDTWKTVTDAWNGYHSVPLRSSDRHLTT 282
Query: 371 AIPALGSW 348
I G W
Sbjct: 283 FITPFGRW 290
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 649 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 708
Query: 371 AIPALGSW 348
I G W
Sbjct: 709 FITPFGRW 716
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 177 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 236
Query: 371 AIPALGSW 348
+ G W
Sbjct: 237 FLTPFGRW 244
>SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 913
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL S +L
Sbjct: 11 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRLSDRHLTT 70
Query: 371 AIPALGSW 348
I G W
Sbjct: 71 FITPFGRW 78
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL S +L
Sbjct: 592 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRLSDRHLTT 651
Query: 371 AIPALGSW 348
I G W
Sbjct: 652 FITPFGRW 659
>SB_15141| Best HMM Match : RVT_1 (HMM E-Value=1.1)
Length = 402
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALG 354
P R V + ++C R L+ +W TV +WN PL +S +L I G
Sbjct: 267 PRRTVDLSPLNKYCQRETFQLARRIPNDTWKTVTDAWNGYHSVPLSSSDRHLTTFITPFG 326
Query: 353 SW 348
W
Sbjct: 327 RW 328
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 115 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 174
Query: 371 AIPALGSW 348
+ G W
Sbjct: 175 FLTPFGRW 182
>SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05)
Length = 288
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W T+ +WN PL +S +L
Sbjct: 71 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTLTDAWNGYHSVPLRSSDRHLTT 130
Query: 371 AIPALGSW 348
I G W
Sbjct: 131 FITPFGRW 138
>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1155
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 395 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 454
Query: 371 AIPALGSW 348
I W
Sbjct: 455 FITPFDRW 462
>SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1059
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN PL +S +L
Sbjct: 568 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTT 627
Query: 371 AIPALGSW 348
I W
Sbjct: 628 FITPFDRW 635
>SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 942
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 95 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 154
Query: 371 AIPALGSW 348
I G W
Sbjct: 155 FITPFGRW 162
>SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 909
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 403 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 462
Query: 371 AIPALGSW 348
I G W
Sbjct: 463 FITPFGRW 470
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + ++C R A PFQ + +W TV +WN L +S +L
Sbjct: 625 PRRTVDLSPLNKYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVRLRSSDRHLTT 684
Query: 371 AIPALGSW 348
I G W
Sbjct: 685 FITPFGRW 692
>SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07)
Length = 1286
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 634 PRRTVDLSPLNKFCQRETFAMESPFHLARRVPKDTWKTVTDAWNGYHSVPLREADRHLTT 693
Query: 371 AIPALGSW 348
I G W
Sbjct: 694 FITPFGRW 701
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 629 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 688
Query: 371 AIPALGSW 348
I G W
Sbjct: 689 FITPFGRW 696
>SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 817
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 447 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 506
Query: 371 AIPALGSW 348
I G W
Sbjct: 507 FITPFGRW 514
>SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3)
Length = 275
Score = 30.7 bits (66), Expect = 1.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 98 LVIYESVPAAHPPYVCY 148
+V+ E +P HPPY+CY
Sbjct: 95 IVVQEDLPTIHPPYLCY 111
>SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 795
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 484 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 543
Query: 371 AIPALGSW 348
I G W
Sbjct: 544 FITPFGRW 551
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 267 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 326
Query: 371 AIPALGSW 348
I G W
Sbjct: 327 FITPFGRW 334
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 489 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 548
Query: 371 AIPALGSW 348
I G W
Sbjct: 549 FITPFGRW 556
>SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 452
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 197 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 256
Query: 371 AIPALGSW 348
I G W
Sbjct: 257 FITPFGRW 264
>SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14)
Length = 707
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 117 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 176
Query: 371 AIPALGSW 348
I G W
Sbjct: 177 FITLFGRW 184
>SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1412
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 577 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 636
Query: 371 AIPALGSW 348
I G W
Sbjct: 637 FITPFGRW 644
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 95 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 154
Query: 371 AIPALGSW 348
I G W
Sbjct: 155 FITPFGRW 162
>SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 651 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 710
Query: 371 AIPALGSW 348
I G W
Sbjct: 711 FITPFGRW 718
>SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 436
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 249 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 308
Query: 371 AIPALGSW 348
I G W
Sbjct: 309 FITPFGRW 316
>SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07)
Length = 303
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 95 PRRTVDLSPLNKFCQRETFAMESPFHLTRRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 154
Query: 371 AIPALGSW 348
I G W
Sbjct: 155 FITPFGRW 162
>SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13)
Length = 776
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 469 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 528
Query: 371 AIPALGSW 348
I G W
Sbjct: 529 FITPFGRW 536
>SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + +HC R A+ FQ + +W TV +WN PL +S L
Sbjct: 394 PRRTVYLSPLNKHCQRKTYAMESMFQLARRIPNDTWKTVNDTWNGYHRVPLRSSDRYLTT 453
Query: 371 AIPALGSW 348
+ G W
Sbjct: 454 FMTPFGRW 461
>SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11)
Length = 296
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + +L
Sbjct: 41 PRRTVDLSPLNKFCQRETFAMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTT 100
Query: 371 AIPALGSW 348
I G W
Sbjct: 101 FITPFGRW 108
>SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21)
Length = 1405
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV ++WN PL + L
Sbjct: 577 PRRTVDLSPLNKFCQRETFAMESPFHLARRVPMDTWKTVTNAWNGHHSVPLREADRPLTT 636
Query: 371 AIPALGSW 348
I G W
Sbjct: 637 FITPFGRW 644
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL + L
Sbjct: 616 PRRTVDLSPLNKFCQRETFAMESPFHLARRVPMDTWKTVTDAWNGYHSVPLRKADRPLTT 675
Query: 371 AIPALGSW 348
I G W
Sbjct: 676 LITPFGRW 683
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Frame = -3
Query: 497 EHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 348
++C R A PFQ + +W TV +WN PL +S +L I G W
Sbjct: 214 KYCQRETYATESPFQLARRIPNDTWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 270
>SB_20450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 109 VDDEGAARRAPASCRLHLPKLLEGFHYVHSREDSIS 2
V++E A +AP R HLP LL F +R + +S
Sbjct: 32 VNNELACFKAPCKLRQHLPALLANFRLTDNRTNEMS 67
>SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66)
Length = 806
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 88 RRAPASCRLHLPKLLEGFHYVHSREDSIS 2
R+AP R HLP LL FH +R +S
Sbjct: 13 RKAPCKLRQHLPALLANFHLTVNRIKEMS 41
>SB_1136| Best HMM Match : HC2 (HMM E-Value=4.2)
Length = 551
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 426 LEFQHRPTFV--RFQHEPKRSDTSAGVLVWVARVSGEGR 316
+ Q P +V R + K +D++ VLVW+ARVS GR
Sbjct: 152 IRIQTNPCYVYGRRKRIEKYTDSNESVLVWMARVSVYGR 190
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 396 RFQHEPKRSDTSAGVLVWVARVSGEGR 316
R + K +D++ VLVW+ARVS GR
Sbjct: 190 RRKRTEKYTDSNESVLVWMARVSVYGR 216
>SB_25300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 193 AVLKTAKARSTGERDVADVGRMGSRHRLVDDE 98
A+ K K R TGER +VG + +R+VD+E
Sbjct: 60 ALEKIRKFRETGERTKFEVGSVKDVYRVVDEE 91
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL L
Sbjct: 399 PRRTVDLSPLNKFCQRETFAMESPFHLARRVPVDTWMTVTDAWNGYHSVPLREEDRPLTT 458
Query: 371 AIPALGSW 348
I G W
Sbjct: 459 FITPFGRW 466
>SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022)
Length = 1012
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 7/68 (10%)
Frame = -3
Query: 530 PSRVVRYASCREHC-RSRIALSDPFQWS------SWNTVISSWNSSIVRPLFASSMNLNA 372
P R V + + C R A+ PF + +W TV +WN PL L
Sbjct: 349 PRRTVDLSPLNKFCQRETFAMESPFHLARRVPVDTWMTVTDAWNGYHSVPLREEDRPLTT 408
Query: 371 AIPALGSW 348
I G W
Sbjct: 409 FITPFGRW 416
>SB_56521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 334 TSNPHQDPSAGIAAFRFMLEANKGRT-MLEFQELMTVF 444
T+ H D SA +RF LE + RT +L+F L VF
Sbjct: 80 TAGSHLDVSATHVIYRFSLERKRKRTQLLDFLALALVF 117
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,701,533
Number of Sequences: 59808
Number of extensions: 395458
Number of successful extensions: 1175
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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