Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30963
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    23   2.9  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   2.9  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.0  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   9.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.0  

>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 418 EFQELMTVFQLLHWNGSLRAMR 483
           +FQ+    FQ+LH   +LR +R
Sbjct: 188 QFQDFSESFQILHAGRALRILR 209


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 418 EFQELMTVFQLLHWNGSLRAMR 483
           +FQ+    FQ+LH   +LR +R
Sbjct: 188 QFQDFSESFQILHAGRALRILR 209


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 418 EFQELMTVFQLLHWNGSLRAMR 483
           +FQ+    FQ+LH   +LR +R
Sbjct: 188 QFQDFSESFQILHAGRALRILR 209


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 479 IALSDPFQWSSWNTVISSWNSSI 411
           I +S   QWSS +T+  +W   +
Sbjct: 488 IFMSSSLQWSSTHTLDVAWRRKV 510


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 479 IALSDPFQWSSWNTVISSWNSSI 411
           I +S   QWSS +T+  +W   +
Sbjct: 526 IFMSSSLQWSSTHTLDVAWRRKV 548


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 570 WAT--REREGLRPVAEYYAR 623
           W T     EGL PVAE+ A+
Sbjct: 334 WVTGVTSEEGLYPVAEFIAK 353


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 561 AREWATREREGLRPVAEYYARSWRDLNASFG 653
           A E A    EG++   E Y  S  D++ +FG
Sbjct: 52  AFEAAHLNAEGMKKYCETYKNSIYDVSMTFG 82


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +3

Query: 570 WAT--REREGLRPVAEYYAR 623
           W T     EGL PVAE+ A+
Sbjct: 334 WVTGVTSEEGLYPVAEFIAK 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,683
Number of Sequences: 438
Number of extensions: 3611
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)