Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30962
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 100 6e-21
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 100 6e-21
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 100 6e-21
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 100 6e-21
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 100 6e-21
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 100 6e-21
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 89 1e-17
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 54 4e-07
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 100 bits (239), Expect = 6e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = -3
Query: 301 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 122
K P++ + K K+MGTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 36 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 95
Query: 121 HKLFTLVTYVPVASIKGLQTENVD 50
+KL+TLVTYVPV + K LQT NVD
Sbjct: 96 NKLYTLVTYVPVTTFKNLQTVNVD 119
Score = 87.4 bits (207), Expect = 5e-17
Identities = 40/49 (81%), Positives = 46/49 (93%), Gaps = 1/49 (2%)
Frame = -1
Query: 402 KPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFA 259
K GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA
Sbjct: 1 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFA 49
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 100 bits (239), Expect = 6e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = -3
Query: 301 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 122
K P++ + K K+MGTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 40 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 99
Query: 121 HKLFTLVTYVPVASIKGLQTENVD 50
+KL+TLVTYVPV + K LQT NVD
Sbjct: 100 NKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/50 (82%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = -1
Query: 405 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFA 259
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFA 53
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 100 bits (239), Expect = 6e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = -3
Query: 301 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 122
K P++ + K K+MGTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 40 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 99
Query: 121 HKLFTLVTYVPVASIKGLQTENVD 50
+KL+TLVTYVPV + K LQT NVD
Sbjct: 100 NKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/50 (82%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = -1
Query: 405 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFA 259
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFA 53
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 100 bits (239), Expect = 6e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = -3
Query: 301 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 122
K P++ + K K+MGTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 40 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 99
Query: 121 HKLFTLVTYVPVASIKGLQTENVD 50
+KL+TLVTYVPV + K LQT NVD
Sbjct: 100 NKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/50 (82%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = -1
Query: 405 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFA 259
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFA 53
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 100 bits (239), Expect = 6e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = -3
Query: 301 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 122
K P++ + K K+MGTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 40 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 99
Query: 121 HKLFTLVTYVPVASIKGLQTENVD 50
+KL+TLVTYVPV + K LQT NVD
Sbjct: 100 NKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/50 (82%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = -1
Query: 405 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFA 259
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFA 53
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 100 bits (239), Expect = 6e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = -3
Query: 301 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 122
K P++ + K K+MGTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 40 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 99
Query: 121 HKLFTLVTYVPVASIKGLQTENVD 50
+KL+TLVTYVPV + K LQT NVD
Sbjct: 100 NKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/50 (82%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = -1
Query: 405 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFA 259
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFA 53
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/50 (82%), Positives = 47/50 (94%), Gaps = 1/50 (2%)
Frame = -1
Query: 405 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFA 259
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFA 53
Score = 89.0 bits (211), Expect = 1e-17
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -3
Query: 301 KACPKSNQRNPKVR*KQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSA 122
K P++ + K K+MGTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 40 KRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSP 99
Query: 121 HKLFTLVTYVPVASIK 74
+KL+TLVTYVPV + K
Sbjct: 100 NKLYTLVTYVPVTTFK 115
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -3
Query: 184 NVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 50
NVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,729,241
Number of Sequences: 237096
Number of extensions: 1883355
Number of successful extensions: 7260
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7260
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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