Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30961
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 118 7e-26
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 109 4e-23
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 107 1e-22
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 87 2e-16
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 83 3e-15
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 83 4e-15
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 75 1e-12
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 74 3e-12
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 70 4e-11
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 69 5e-11
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 69 1e-10
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 63 4e-09
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 62 6e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 61 2e-08
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 60 3e-08
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 59 6e-08
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 58 1e-07
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 57 2e-07
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 55 1e-06
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 53 4e-06
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 53 5e-06
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 52 9e-06
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 49 6e-05
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 49 8e-05
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 44 0.002
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 44 0.003
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 40 0.029
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 38 0.20
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 36 0.63
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 36 0.63
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 34 2.5
UniRef50_UPI0000499EE1 Cluster: hypothetical protein 258.t00004;... 33 4.4
UniRef50_Q4SDX7 Cluster: Chromosome undetermined SCAF14628, whol... 33 4.4
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.4
UniRef50_Q2NNA4 Cluster: Noggin5; n=1; Danio rerio|Rep: Noggin5 ... 33 5.8
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 118 bits (285), Expect = 7e-26
Identities = 57/71 (80%), Positives = 62/71 (87%)
Frame = +2
Query: 260 LMGLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKRE 439
L +QT H+KF+RDLVRE VGHA YEK MELLKVSKDKRALKFLKR LGTHIRAKRKRE
Sbjct: 39 LKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 98
Query: 440 ELSNVLAQMRK 472
ELSN+L Q+RK
Sbjct: 99 ELSNILTQLRK 109
Score = 33.5 bits (73), Expect = 3.3
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 147 MAPRFEIAVGLRKGHKTTNI 206
MA R+E+A+GL KGHKT+ I
Sbjct: 1 MAVRYELAIGLNKGHKTSKI 20
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 109 bits (262), Expect = 4e-23
Identities = 53/71 (74%), Positives = 58/71 (81%)
Frame = +2
Query: 260 LMGLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKRE 439
L G+QT H+KFVRD++RE VGH EK ELLKV KDKRALKFLKR LGTHIRAKRKRE
Sbjct: 9 LKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIRAKRKRE 68
Query: 440 ELSNVLAQMRK 472
ELSN+L QM K
Sbjct: 69 ELSNILTQMGK 79
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 107 bits (258), Expect = 1e-22
Identities = 52/69 (75%), Positives = 59/69 (85%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREEL 445
G T H+KFVRD++RE G A YE+ AMELLKVSKDKRALKF+K+ +GTHIRAKRKREEL
Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREEL 90
Query: 446 SNVLAQMRK 472
SNVLA MRK
Sbjct: 91 SNVLAAMRK 99
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 87.4 bits (207), Expect = 2e-16
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREEL 445
G+ + +K VR+LVRE G A YE+ +E+L++SKDKRALKFLKR +GTH RAK KREEL
Sbjct: 33 GVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREEL 92
Query: 446 SNVLAQMRK 472
NV+ RK
Sbjct: 93 QNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 83.4 bits (197), Expect = 3e-15
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREEL 445
G T FVR L+RE VG A YEK ELLKV KDKRALK KR LGTH RAK+KREE+
Sbjct: 34 GKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEM 93
Query: 446 SNVLAQMR 469
+ V+ +MR
Sbjct: 94 AGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 83.0 bits (196), Expect = 4e-15
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = +2
Query: 290 FVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQMR 469
F+R L+RE G A YEK ELLKV KDKRALK KR LGTH RAKRKREE+S+VL +MR
Sbjct: 42 FIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 74.5 bits (175), Expect = 1e-12
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +2
Query: 272 QTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSN 451
Q+ + VR ++ E G A YEK +ELL++ KDKRALKF K+ LGTH+RAKRKRE+++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 452 VLAQMR 469
L R
Sbjct: 88 ALRSKR 93
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREEL 445
GL+T FVR ++RE G + YEK MELL+ SKDK+A K K+ LGT +R+KRK EEL
Sbjct: 126 GLKTEKKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSKRKIEEL 185
Query: 446 SNVLAQMRK 472
S V+ + R+
Sbjct: 186 SAVIVEQRR 194
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 69.7 bits (163), Expect = 4e-11
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +2
Query: 284 SKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQ 463
++F +D+++E A E+ A E KVSKDK+ALKF++++LGTHI AKRK ELSNVLA
Sbjct: 43 TEFSQDVIQEVFSFALNEQHATEQFKVSKDKQALKFIQKMLGTHICAKRKARELSNVLAT 102
Query: 464 MRK 472
R+
Sbjct: 103 TRE 105
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 69.3 bits (162), Expect = 5e-11
Identities = 35/68 (51%), Positives = 45/68 (66%)
Frame = +2
Query: 269 LQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELS 448
L T H+KFV+D++RE Y+ + L KVS DK A KF+K+ +G HI KRK EELS
Sbjct: 32 LLTKHTKFVQDMIREVCDFMSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELS 91
Query: 449 NVLAQMRK 472
V+A MRK
Sbjct: 92 IVIAAMRK 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2
Query: 335 EKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQMRK 472
++ AMELLKVSKDKR L+ +K+ +GTH+RAKR+ EELSNVLA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 63.3 bits (147), Expect = 4e-09
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +2
Query: 284 SKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQ 463
+ FVR +VRE G A YE+ MEL++ S+DKRA K K+ LGT RAK K EEL++V+
Sbjct: 35 TSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQS 94
Query: 464 MR 469
R
Sbjct: 95 SR 96
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 62.5 bits (145), Expect = 6e-09
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREEL 445
G + +KFVR LVRE G + YE+ ++L++ S +KRA K K+ LG+ RAK K EE+
Sbjct: 31 GAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEM 90
Query: 446 SNVLAQMRK 472
+N++A R+
Sbjct: 91 NNIIAASRR 99
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +2
Query: 356 LKVSKDKRALKFLKRLLGTHIRAKRKREELSN 451
LKVSKDKRALKF+K+ +GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +2
Query: 287 KFVRDLVREFVGHAQYEKMAMELLKV---SKDKRALKFLKRLLGTHIRAKRKREELSNVL 457
+ ++D+VRE G + YEK +EL+K+ + KR+LK+ K+ LGTH R K KREE+ V+
Sbjct: 60 ELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEIQKVV 119
Query: 458 AQMRK 472
R+
Sbjct: 120 ILQRR 124
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = +2
Query: 293 VRDLVREFVGHAQYEKMAMELLKVSKD---KRALKFLKRLLGTHIRAKRKREELSNVLAQ 463
+ D+VRE G + YEK +EL+KV KR+LK+ K+ LGTH R K KREE+ ++
Sbjct: 44 INDVVREIAGFSPYEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMM 103
Query: 464 MRK 472
R+
Sbjct: 104 QRR 106
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKV---SKDKRALKFLKRLLGTHIRAKRKR 436
GL+T + V +++RE G A YE+ +EL+K S KRALKF K+ LGT RAK K
Sbjct: 42 GLKTKRNALVSEVIREVCGFAPYERHMIELIKTGSASAQKRALKFAKKRLGTLRRAKTKN 101
Query: 437 EELSNVLAQMRK 472
+E+ V+ RK
Sbjct: 102 DEMMRVVELQRK 113
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = +2
Query: 281 HSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELS 448
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+ LG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +2
Query: 293 VRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNV 454
+RD++RE G + YE+ ELLK DKRALK K+ LG+ K+KR++++N+
Sbjct: 45 IRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDDIANI 98
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 293 VRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQMRK 472
V+ ++ + VG + E+ ELL+V KDKRALKF K+ LG+ AK++R ++ L Q K
Sbjct: 48 VKAIISDLVGFSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +2
Query: 290 FVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQ 463
F R +V E VG YE+ M+L+K+ + + A +FLK+ LGTH RA +K L V+ +
Sbjct: 28 FARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHRRAMKKLNTLEEVVQE 85
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 52.0 bits (119), Expect = 9e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 281 HSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLA 460
H + V+ ++ + VG + EK E L+V K+KRALK+ K+ LG AK+KR ++ L
Sbjct: 39 HLRAVKAIIADLVGLSPLEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEALR 98
Query: 461 QMRK 472
K
Sbjct: 99 HATK 102
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 49.2 bits (112), Expect = 6e-05
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKRE 439
G + + FVR+L+RE G YEK ELLKV KDKRALK + +G H + ++ E
Sbjct: 34 GKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 48.8 bits (111), Expect = 8e-05
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +2
Query: 269 LQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRA 424
+QT +K VRDL+ E V HA ++K M+LLKV +DK AL+F+ +HIRA
Sbjct: 37 IQTKLTKLVRDLIHEVVVHATFKKKDMQLLKVFQDKLALRFMSG--PSHIRA 86
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 293 VRDLVREFVGHAQYEKMAMELLKVS--KD-KRALKFLKRLLGTHIRAKRKREELSNVLAQ 463
VR +++E G + YEK +EL K + KD K+A K + LGT+ R KRK E + N+
Sbjct: 42 VRKVIQEVAGLSPYEKRIIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRA 101
Query: 464 MRK 472
MRK
Sbjct: 102 MRK 104
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +2
Query: 362 VSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQMR 469
V+K + L+ R LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 40.3 bits (90), Expect = 0.029
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +2
Query: 233 QSHQIYATTLMGLQTIHSKFVRDLVREFVGHAQYEKMAMELLKVSKDKR 379
+ H++ + G T H+KF+ + RE G A YE A ELLKVSK K+
Sbjct: 71 KGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 37.5 bits (83), Expect = 0.20
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 293 VRDLVREFVGHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVLAQMRK 472
V D++RE G YE+ M+LL+ DK+AL + K+ + + E SNVL + K
Sbjct: 31 VNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNVLLEAIK 90
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 35.9 bits (79), Expect = 0.63
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 527 T*ISLFKLNGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 384
T + + + +G GD P + P SS + RC L SSWR I +RT+
Sbjct: 91 TGVRMARRHGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 35.9 bits (79), Expect = 0.63
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +2
Query: 266 GLQTIHSKFVRDLVREFVGHAQYEKMAMELLKV 364
G T +K VR+LVRE G A YE+ MELL V
Sbjct: 34 GAATKKTKVVRELVREITGFAPYERRMMELLLV 66
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 33.9 bits (74), Expect = 2.5
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 320 GHAQYEKMAMELLKVSKDKRALKFLKRLLGTHIRAKRKREELSNVL 457
G ++EK +K+ +++ALK K+ LG RAK+K + ++++L
Sbjct: 26 GLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSINHIL 71
>UniRef50_UPI0000499EE1 Cluster: hypothetical protein 258.t00004;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 258.t00004 - Entamoeba histolytica HM-1:IMSS
Length = 260
Score = 33.1 bits (72), Expect = 4.4
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = -1
Query: 271 KTH*CSGINLMALSVIPLRPADILVV--LWPFRRPTAISKRGAM--LKSQNTECQSQNNL 104
+TH CS INL + RP +I ++ W R S + LK QN +C S N+L
Sbjct: 116 RTHCCSDINLKDIKYAIPRPLNIPIIPLYWNILRNITYSTSHSFTSLKLQNIKCFSSNSL 175
Query: 103 SQCTPLPSQRLSFSLFYP 50
+ + S + L YP
Sbjct: 176 IKINAI-SSMVGTLLSYP 192
>UniRef50_Q4SDX7 Cluster: Chromosome undetermined SCAF14628, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14628,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 728
Score = 33.1 bits (72), Expect = 4.4
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -3
Query: 215 ASGYISCFVAFSQAYCDLKTRSHAEITKHRMSISK*PLTMHTTPITAPFVLTILSQGS 42
A+G I VA + +C T +H+ + R ++ L +P APF T++ +GS
Sbjct: 564 ATGTIIIRVADANDHCPTLTSTHSSLCADRKTVYITALDEDASPNAAPFTFTVIPEGS 621
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 33.1 bits (72), Expect = 4.4
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 144 SMAPRFEIAVGLRKGHKTT 200
+MAP+ E+AVGL+KGHK T
Sbjct: 154 NMAPKVEMAVGLQKGHKVT 172
>UniRef50_Q2NNA4 Cluster: Noggin5; n=1; Danio rerio|Rep: Noggin5 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 210
Score = 32.7 bits (71), Expect = 5.8
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 333 MRRWLWSYLRCQKTSVL*SS*SDYWAHTSAPRGSVKNLATCSLR*GR--QPPRLITITI 503
MRRW+WSY RC S+ +W G +CSL G +P + +++T+
Sbjct: 121 MRRWMWSYTRCPVLSMWKDLGVRFWPR-YVKEGQCSTERSCSLPEGMFCKPVQSVSVTL 178
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,519,908
Number of Sequences: 1657284
Number of extensions: 9111964
Number of successful extensions: 21876
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 21391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21872
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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