Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30960
         (717 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14697| Best HMM Match : Psf2 (HMM E-Value=8.7e-08)                 100   1e-21
SB_49958| Best HMM Match : Mak10 (HMM E-Value=7.7)                     36   0.025
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.7  

>SB_14697| Best HMM Match : Psf2 (HMM E-Value=8.7e-08)
          Length = 323

 Score =  100 bits (240), Expect = 1e-21
 Identities = 40/63 (63%), Positives = 54/63 (85%)
 Frame = +3

Query: 3   KLYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHE 182
           KL+P+CGKL PDGL+ L++ADDY+QV+A+A+YY++Y  LFEG+G   G+KTLEDKFFEHE
Sbjct: 70  KLFPQCGKLYPDGLSRLSKADDYDQVRAIADYYSDYKVLFEGSGTGPGEKTLEDKFFEHE 129

Query: 183 VSL 191
             +
Sbjct: 130 YDI 132


>SB_49958| Best HMM Match : Mak10 (HMM E-Value=7.7)
          Length = 176

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +3

Query: 33  PDGLAALARADDYEQVKAVAEYYAEYSAL 119
           P  + ALA ADD E V+ V EYYA+Y A+
Sbjct: 76  PASIRALAEADDQEVVREVQEYYADYFAI 104


>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 367

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 132 QLLQTKQNTQHSIQQQPSLVHNHQHEPVRQDHQ 34
           QL Q +Q  QH  QQQ    H HQH+  +Q  Q
Sbjct: 295 QLHQHQQ--QHQYQQQHQHQHQHQHQQQQQQQQ 325



 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -1

Query: 132 QLLQTKQNTQHSIQQQPSLVHNHQHEPVRQDHQ 34
           QL Q  Q  QH  Q Q    H HQH+   Q  Q
Sbjct: 289 QLHQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQ 321


>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 520

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -2

Query: 164 VFQSFVSHIIASSFKQSRILSIVFSNSLHLFIIISTSQCGKTIRVEFATTGIQ 6
           +F+ F++  +  S   SR+L+ + ++SL    +  T   GK+  VE    G Q
Sbjct: 311 MFKKFIAVQLHESLCDSRVLATIATHSLETLSLPLTYDAGKSEEVEILPLGRQ 363


>SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1702

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 186 LPHVQRICLPKFCLPHYCQLLQT 118
           LP V+R+     CLPH  QLL T
Sbjct: 802 LPRVKRMLSETTCLPHVVQLLMT 824


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,703,617
Number of Sequences: 59808
Number of extensions: 440328
Number of successful extensions: 922
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)