Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30959
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting... 142 2e-33
X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase pr... 141 3e-33
BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting... 105 2e-22
AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2 s... 105 2e-22
AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens ... 105 2e-22
L05087-1|AAC15852.1| 88|Homo sapiens proton ATPase accessory s... 100 1e-20
>BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d1 protein.
Length = 351
Score = 142 bits (343), Expect = 2e-33
Identities = 63/86 (73%), Positives = 73/86 (84%)
Frame = +3
Query: 3 KLYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHE 182
KL+P CG+L P+GLA LARADDYEQVK VA+YY EY LFEGAG+N GDKTLED+FFEHE
Sbjct: 239 KLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHE 298
Query: 183 VSLNVHAFLQQFHFGVFYSYLKLKNR 260
V LN AFL QFHFGVFY+++KLK +
Sbjct: 299 VKLNKLAFLNQFHFGVFYAFVKLKEQ 324
Score = 70.1 bits (164), Expect = 8e-12
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 221 FWSFLFLSEIKEQECRNIVWISECVAQKHRAKIDNYIPIF 340
F F ++KEQECRNIVWI+EC+AQ+HRAKIDNYIPIF
Sbjct: 312 FGVFYAFVKLKEQECRNIVWIAECIAQRHRAKIDNYIPIF 351
>X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase
protein.
Length = 274
Score = 141 bits (341), Expect = 3e-33
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +3
Query: 3 KLYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHE 182
KL+P CG+L P+GLA LARADDYEQVK +A+YY EY LFEGAG+N GDKTLED+FFEHE
Sbjct: 162 KLFPHCGRLYPEGLAQLARADDYEQVKKLADYYPEYKLLFEGAGSNPGDKTLEDRFFEHE 221
Query: 183 VSLNVHAFLQQFHFGVFYSYLKLKNR 260
V LN AFL QFHFGVFY+++KLK +
Sbjct: 222 VKLNKLAFLNQFHFGVFYAFVKLKEQ 247
Score = 70.1 bits (164), Expect = 8e-12
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 221 FWSFLFLSEIKEQECRNIVWISECVAQKHRAKIDNYIPIF 340
F F ++KEQECRNIVWI+EC+AQ+HRAKIDNYIPIF
Sbjct: 235 FGVFYAFVKLKEQECRNIVWIAECIAQRHRAKIDNYIPIF 274
>BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d2 protein.
Length = 350
Score = 105 bits (251), Expect = 2e-22
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +3
Query: 6 LYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHEV 185
LYP GKL P+GL LA+A+D++Q+K VA++Y Y LFE G + G KTLED F+E EV
Sbjct: 240 LYPTFGKLYPEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGS-GGKTLEDVFYEREV 298
Query: 186 SLNVHAFLQQFHFGVFYSYLKLKNR 260
+NV AF +QFH+GVFY+Y+KLK +
Sbjct: 299 QMNVLAFNRQFHYGVFYAYVKLKEQ 323
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/31 (67%), Positives = 29/31 (93%)
Frame = +2
Query: 245 EIKEQECRNIVWISECVAQKHRAKIDNYIPI 337
++KEQE RNIVWI+EC++Q+HR KI++YIPI
Sbjct: 319 KLKEQEIRNIVWIAECISQRHRTKINSYIPI 349
>AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2
subunit protein.
Length = 350
Score = 105 bits (251), Expect = 2e-22
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +3
Query: 6 LYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHEV 185
LYP GKL P+GL LA+A+D++Q+K VA++Y Y LFE G + G KTLED F+E EV
Sbjct: 240 LYPTFGKLYPEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGS-GGKTLEDVFYEREV 298
Query: 186 SLNVHAFLQQFHFGVFYSYLKLKNR 260
+NV AF +QFH+GVFY+Y+KLK +
Sbjct: 299 QMNVLAFNRQFHYGVFYAYVKLKEQ 323
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/31 (67%), Positives = 29/31 (93%)
Frame = +2
Query: 245 EIKEQECRNIVWISECVAQKHRAKIDNYIPI 337
++KEQE RNIVWI+EC++Q+HR KI++YIPI
Sbjct: 319 KLKEQEIRNIVWIAECISQRHRTKINSYIPI 349
>AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38708 fis, clone KIDNE2002872, moderately
similar to Mus musculus Ac39/physophilin mRNA. ).
Length = 350
Score = 105 bits (251), Expect = 2e-22
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +3
Query: 6 LYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHEV 185
LYP GKL P+GL LA+A+D++Q+K VA++Y Y LFE G + G KTLED F+E EV
Sbjct: 240 LYPTFGKLYPEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGS-GGKTLEDVFYEREV 298
Query: 186 SLNVHAFLQQFHFGVFYSYLKLKNR 260
+NV AF +QFH+GVFY+Y+KLK +
Sbjct: 299 QMNVLAFNRQFHYGVFYAYVKLKEQ 323
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/31 (67%), Positives = 29/31 (93%)
Frame = +2
Query: 245 EIKEQECRNIVWISECVAQKHRAKIDNYIPI 337
++KEQE RNIVWI+EC++Q+HR KI++YIPI
Sbjct: 319 KLKEQEIRNIVWIAECISQRHRTKINSYIPI 349
>L05087-1|AAC15852.1| 88|Homo sapiens proton ATPase accessory
subunit protein.
Length = 88
Score = 99.5 bits (237), Expect = 1e-20
Identities = 44/61 (72%), Positives = 51/61 (83%)
Frame = +3
Query: 78 VKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHEVSLNVHAFLQQFHFGVFYSYLKLKN 257
VK VA+YY EY LFEGAG+N GDKTLED+FFEHEV LN AFL QFHFGVFY+++KLK
Sbjct: 1 VKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKE 60
Query: 258 R 260
+
Sbjct: 61 Q 61
Score = 70.1 bits (164), Expect = 8e-12
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 221 FWSFLFLSEIKEQECRNIVWISECVAQKHRAKIDNYIPIF 340
F F ++KEQECRNIVWI+EC+AQ+HRAKIDNYIPIF
Sbjct: 49 FGVFYAFVKLKEQECRNIVWIAECIAQRHRAKIDNYIPIF 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,237,268
Number of Sequences: 237096
Number of extensions: 2192940
Number of successful extensions: 11259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11244
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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