Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30958
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6DE76 Cluster: CRISPR-associated protein, Csm1 family;...    34   3.4  
UniRef50_Q8X2M0 Cluster: Putative uncharacterized protein ECs131...    33   4.5  
UniRef50_Q5M6S2 Cluster: Putative sugar transferase; n=2; Campyl...    33   6.0  
UniRef50_Q0P8H6 Cluster: Putative sugar transferase; n=6; Campyl...    33   7.9  
UniRef50_Q8IEN1 Cluster: Putative uncharacterized protein MAL13P...    33   7.9  

>UniRef50_A6DE76 Cluster: CRISPR-associated protein, Csm1 family;
           n=1; Caminibacter mediatlanticus TB-2|Rep:
           CRISPR-associated protein, Csm1 family - Caminibacter
           mediatlanticus TB-2
          Length = 748

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = +2

Query: 440 RYVYFRLYKNLYSCTIGYTFFFRIYEI*KIDFLIWIKK*FDEMLANFCFKEFFRWLI 610
           R  +  +Y+ L   + G TF +R+Y+  ++   ++  K F+ +L N  +K  FR+L+
Sbjct: 649 REFFEEVYEELKEFSSGITFLYRLYDFMEMRDKLYEDKSFESILQNSRWKYMFRYLV 705


>UniRef50_Q8X2M0 Cluster: Putative uncharacterized protein ECs1318;
           n=1; Escherichia coli O157:H7|Rep: Putative
           uncharacterized protein ECs1318 - Escherichia coli
           O157:H7
          Length = 47

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 286 KAIFVLLCILPMYVCVYINCKYLKYLYFY 372
           K I + L ILP  +  Y NC YLK +YFY
Sbjct: 17  KLILIFLIILPPLIRAY-NCPYLKVIYFY 44


>UniRef50_Q5M6S2 Cluster: Putative sugar transferase; n=2;
           Campylobacter jejuni|Rep: Putative sugar transferase -
           Campylobacter jejuni
          Length = 349

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +3

Query: 117 SVIYLRDFLGSVLFHVRRDIETICLLTVMKTKTSPLLQTNHLSERRKSVLFSSSNS*GH 293
           S  Y+++ L SV+F   ++IE +C+       T  +L++    + R  ++FS   S G+
Sbjct: 21  SAKYIKECLDSVIFQSLKEIEILCIDAYSIDGTIDILKSYEKQDSRIKIIFSKKKSLGY 79


>UniRef50_Q0P8H6 Cluster: Putative sugar transferase; n=6;
           Campylobacter jejuni|Rep: Putative sugar transferase -
           Campylobacter jejuni
          Length = 776

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +3

Query: 117 SVIYLRDFLGSVLFHVRRDIETICLLTVMKTKTSPLLQTNHLSERRKSVLFSSSNS*GH 293
           S+ Y+R+ + S+L    +DIE +C+       T  +L+     ++R  V+ S   S G+
Sbjct: 18  SISYIRECIDSILNQTLKDIEILCIDANSTDGTLEVLKNYEKKDKRLRVIISDKKSYGY 76


>UniRef50_Q8IEN1 Cluster: Putative uncharacterized protein MAL13P1.39;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL13P1.39 - Plasmodium
            falciparum (isolate 3D7)
          Length = 6088

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/51 (31%), Positives = 32/51 (62%)
 Frame = -1

Query: 165  VREKERFPKNLLSK*QTFKSLCSVLRKT*IAYRYNNNITKLSTYFNIHNTK 13
            + E+E   KN+ +K +  K + ++L+K  + YRY +N++  + Y+NI+  K
Sbjct: 1061 MEERENASKNIFAKNKKKKIILNILKK--VYYRYEHNLS--NEYYNIYKLK 1107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,704,849
Number of Sequences: 1657284
Number of extensions: 10153800
Number of successful extensions: 22654
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22621
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)