Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30956
(767 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 106 5e-22
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 102 9e-21
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 101 3e-20
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 100 5e-20
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 99 6e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 98 2e-19
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 98 2e-19
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 98 2e-19
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 98 2e-19
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 97 3e-19
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 96 1e-18
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 92 2e-17
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 92 2e-17
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 91 3e-17
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 88 2e-16
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 88 3e-16
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 87 3e-16
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 87 3e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 86 8e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 81 2e-14
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 81 2e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 81 4e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 80 5e-14
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 79 1e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 79 1e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 2e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 77 4e-13
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 77 6e-13
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 75 3e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 8e-12
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 72 2e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 71 2e-11
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 71 4e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 69 1e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 68 2e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 67 4e-10
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 66 1e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 66 1e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 65 2e-09
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 65 2e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 65 2e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 65 2e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 63 6e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 63 6e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 63 8e-09
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 62 1e-08
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 62 1e-08
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 61 3e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 61 3e-08
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 61 3e-08
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 60 4e-08
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 60 4e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 60 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 59 1e-07
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 59 1e-07
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 58 2e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 58 2e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 58 2e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 57 4e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 57 6e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 56 1e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 56 1e-06
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 56 1e-06
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 55 2e-06
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 54 3e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 54 3e-06
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 54 4e-06
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 54 5e-06
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 54 5e-06
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 53 7e-06
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 53 9e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 53 9e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 52 2e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 52 2e-05
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 52 2e-05
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 52 2e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 52 2e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 50 6e-05
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 49 1e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 48 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 48 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 46 8e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 46 0.001
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 44 0.003
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 44 0.006
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 43 0.007
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.007
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 42 0.017
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 42 0.022
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 42 0.022
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 40 0.051
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 40 0.068
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.12
UniRef50_Q7NIC1 Cluster: Gll2262 protein; n=2; Bacteria|Rep: Gll... 37 0.63
UniRef50_O77308 Cluster: ABC transporter, putative; n=2; Plasmod... 35 1.9
UniRef50_A6EN33 Cluster: Di-/tripeptide transporter; n=2; Bacter... 34 3.4
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 4.5
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 4.5
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 106 bits (255), Expect = 5e-22
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPE
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPE 215
Query: 688 VYILI 702
VYILI
Sbjct: 216 VYILI 220
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 425 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 508
ISS SFDQ+P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 74.5 bits (175), Expect = 3e-12
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 261 *DFDSYPPPL 290
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 102 bits (245), Expect = 9e-21
Identities = 52/83 (62%), Positives = 61/83 (73%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP+
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPK 239
Query: 688 VYILIFTRIWYNFSYYFTRKRKK 756
+ + F++ +F F +K +K
Sbjct: 240 L-MFSFSQDLVSFHMLFPKKVEK 261
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 425 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 508
ISS SFDQ+P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 81.8 bits (193), Expect = 2e-14
Identities = 47/96 (48%), Positives = 50/96 (52%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 11 DIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPI 70
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N LVPL+LGAPD+AFPR+ F PP L
Sbjct: 71 MIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 101 bits (241), Expect = 3e-20
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPE 245
Query: 688 VYILI 702
VYILI
Sbjct: 246 VYILI 250
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 425 ISS 433
+SS
Sbjct: 158 VSS 160
Score = 56.8 bits (131), Expect = 6e-07
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 15 DIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVM 74
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N VP+++GAPD+AFPR+ F PP L
Sbjct: 75 PAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 100 bits (239), Expect = 5e-20
Identities = 51/86 (59%), Positives = 55/86 (63%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPE
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPE 226
Query: 688 VYILIFTRIWYNFSYYFTRKRKKRNF 765
VYILI F KK F
Sbjct: 227 VYILILPGFGIISHMIFNESGKKETF 252
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/63 (49%), Positives = 34/63 (53%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 425 ISS 433
SS
Sbjct: 139 ASS 141
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 99 bits (238), Expect = 6e-20
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPE 242
Query: 688 VYILI 702
VYILI
Sbjct: 243 VYILI 247
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 425 ISS 433
ISS
Sbjct: 155 ISS 157
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 98.3 bits (234), Expect = 2e-19
Identities = 52/83 (62%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 243
Query: 688 VYILI---FTRIWYNFSYYFTRK 747
VYILI F I + +YY +K
Sbjct: 244 VYILILPGFGMISHVVTYYAGKK 266
Score = 75.8 bits (178), Expect = 1e-12
Identities = 42/94 (44%), Positives = 48/94 (51%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 15 DIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPI 74
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 284
N LVPL++GAPD+AFPR+ F PP
Sbjct: 75 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 425 ISS 433
ISS
Sbjct: 156 ISS 158
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 98.3 bits (234), Expect = 2e-19
Identities = 52/83 (62%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 688 VYILI---FTRIWYNFSYYFTRK 747
VYILI F I + +YY +K
Sbjct: 243 VYILILPGFGMISHIVTYYSGKK 265
Score = 72.9 bits (171), Expect = 8e-12
Identities = 41/96 (42%), Positives = 48/96 (50%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 14 DIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPI 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N LVPL++GAPD+AFPR+ F PP L
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 425 ISS 433
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 98.3 bits (234), Expect = 2e-19
Identities = 52/83 (62%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 688 VYILI---FTRIWYNFSYYFTRK 747
VYILI F I + +YY +K
Sbjct: 243 VYILILPGFGIISHVVAYYAGKK 265
Score = 73.3 bits (172), Expect = 6e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 284
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 LIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 425 ISS 433
+SS
Sbjct: 155 VSS 157
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/83 (61%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 688 VYILI---FTRIWYNFSYYFTRK 747
VYILI F I + +YY +K
Sbjct: 243 VYILILPGFGMISHVVTYYAGKK 265
Score = 73.3 bits (172), Expect = 6e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPV 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 284
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 425 ISS 433
+SS
Sbjct: 155 VSS 157
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 97.5 bits (232), Expect = 3e-19
Identities = 46/65 (70%), Positives = 51/65 (78%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPE
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPE 250
Query: 688 VYILI 702
VYILI
Sbjct: 251 VYILI 255
Score = 62.9 bits (146), Expect = 8e-09
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 425 ISS 433
SS
Sbjct: 163 ASS 165
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 20 DIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVM 79
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N LVP+++G+PD+AFPR+ F PP L
Sbjct: 80 PVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 95.9 bits (228), Expect = 1e-18
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2
Query: 289 KGGG*ESKSYIIIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 110
K GG + IRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 109 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 11
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = -1
Query: 665 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTN 510
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTN 51
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -3
Query: 432 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 265
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 91.9 bits (218), Expect = 2e-17
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPE
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPE 348
Query: 688 VYILI 702
VYI+I
Sbjct: 349 VYIVI 353
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 425 ISS 433
SS
Sbjct: 261 ASS 263
Score = 37.5 bits (83), Expect = 0.36
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 251
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 252 I 254
+
Sbjct: 203 L 203
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 91.9 bits (218), Expect = 2e-17
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPE
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPE 243
Query: 688 VYILI 702
VYILI
Sbjct: 244 VYILI 248
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 425 ISS 433
ISS
Sbjct: 156 ISS 158
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 179
DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 14 DIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMP 73
Query: 180 XXXXXXXN*LVPLILGAPDIAFPRI 254
N L+PL LG PD+ FPR+
Sbjct: 74 ALIGGFGNFLLPLGLGGPDMGFPRL 98
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/65 (64%), Positives = 48/65 (73%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPE
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPE 246
Query: 688 VYILI 702
VYILI
Sbjct: 247 VYILI 251
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/63 (49%), Positives = 32/63 (50%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 425 ISS 433
I S
Sbjct: 159 IGS 161
Score = 40.7 bits (91), Expect = 0.039
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/65 (64%), Positives = 48/65 (73%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPE
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPE 285
Query: 688 VYILI 702
VYI+I
Sbjct: 286 VYIMI 290
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 320 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 36.3 bits (80), Expect = 0.84
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
++N ++TAH N VP+++GAPD+AFPR+
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRM 137
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPE
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPE 269
Query: 688 VYILI 702
VYILI
Sbjct: 270 VYILI 274
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/63 (46%), Positives = 35/63 (55%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 425 ISS 433
ISS
Sbjct: 182 ISS 184
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRL 124
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/65 (64%), Positives = 46/65 (70%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPE
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPE 243
Query: 688 VYILI 702
VYILI
Sbjct: 244 VYILI 248
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 425 ISS 433
ISS
Sbjct: 156 ISS 158
Score = 41.9 bits (94), Expect = 0.017
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPE
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPE 243
Query: 688 VYILI 702
VYILI
Sbjct: 244 VYILI 248
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 425 ISS 433
ISS
Sbjct: 156 ISS 158
Score = 43.6 bits (98), Expect = 0.006
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRI 254
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 86.2 bits (204), Expect = 8e-16
Identities = 42/58 (72%), Positives = 44/58 (75%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 681
LFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 314 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 688 VYILI 702
VYILI
Sbjct: 261 VYILI 265
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISS 433
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 688 VYILI 702
VYILI
Sbjct: 261 VYILI 265
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISS 433
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +1
Query: 577 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILI 273
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 179
DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 42 DIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMP 101
Query: 180 XXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N L+PL++G PD+AFPR+ F PP L
Sbjct: 102 ALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 412
P NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 413 HLAGISS 433
HL+G+SS
Sbjct: 184 HLSGVSS 190
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 688 VYILI 702
VYI++
Sbjct: 246 VYIIL 250
Score = 39.5 bits (88), Expect = 0.090
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 96 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
G L GD Q YN ++T+H N +P++ G PD+ FPR+
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRL 100
Score = 39.5 bits (88), Expect = 0.090
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 425 ISS 433
ISS
Sbjct: 158 ISS 160
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +1
Query: 568 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLI 337
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 323 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFGAML 243
Query: 688 VYILIFTRIWYNFSY 732
++ +W + Y
Sbjct: 244 AIGVLGFIVWADHMY 258
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/63 (57%), Positives = 40/63 (63%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 425 ISS 433
+SS
Sbjct: 156 LSS 158
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/97 (38%), Positives = 47/97 (48%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 15 DIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPT 74
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLY 293
N VPL++GAPD+AFPR+ F PP L+
Sbjct: 75 MIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 666
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 425 ISS 433
+SS
Sbjct: 138 VSS 140
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/70 (50%), Positives = 41/70 (58%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 261 *DFDSYPPPL 290
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 77.4 bits (182), Expect = 4e-13
Identities = 42/74 (56%), Positives = 48/74 (64%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHL F
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHL---FSKTT 239
Query: 688 VYILIFTRIWYNFS 729
+YI F I Y F+
Sbjct: 240 LYISFFYLI-YKFT 252
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 425 ISS 433
ISS
Sbjct: 155 ISS 157
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
+FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPE
Sbjct: 193 MFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPE 252
Query: 688 VYILI 702
VY++I
Sbjct: 253 VYVII 257
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 74.5 bits (175), Expect = 3e-12
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +1
Query: 568 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILI
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILI 250
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 425 ISS 433
+SS
Sbjct: 157 MSS 159
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGT+Y EL +PG + +Y++I+T HA
Sbjct: 16 DIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPT 75
Query: 183 XXXXXXN*LVPLILGAPDIAFPRI 254
N +PL++ D++ PR+
Sbjct: 76 SIGGLGNWFIPLMIKIKDLSMPRL 99
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 72.9 bits (171), Expect = 8e-12
Identities = 40/94 (42%), Positives = 47/94 (50%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 3 DIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 62
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 284
N L+PL++GAPD+AFPR+ F PP
Sbjct: 63 MIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 425 ISS 433
ISS
Sbjct: 144 ISS 146
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 627
LFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1
Query: 571 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILI 253
Score = 36.7 bits (81), Expect = 0.63
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 317 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 433
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTV 243
Query: 688 VYILIFTRIWYNFSYY 735
I++ + YN ++
Sbjct: 244 ATIIML--MMYNDMHF 257
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 425 ISS 433
ISS
Sbjct: 156 ISS 158
Score = 43.6 bits (98), Expect = 0.006
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRI 254
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 568 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVI 231
Score = 36.7 bits (81), Expect = 0.63
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 326 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 678
LFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 425 ISS 433
ISS
Sbjct: 156 ISS 158
Score = 41.5 bits (93), Expect = 0.022
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PG L G++Q++N +V HA
Sbjct: 13 DIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRI 254
N ++PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYMLPLMIGATDTAFPRI 98
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 68.1 bits (159), Expect = 2e-10
Identities = 56/181 (30%), Positives = 74/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 261 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFXXXX 440
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 441 XXXXXXXXXXXXXXXXXXXXNYPICMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 617
IC+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 618 F 620
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 380 GRSVDLAIFSLHLAGISS 433
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 425 ISS 433
ISS
Sbjct: 155 ISS 157
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPE
Sbjct: 199 LFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPE 258
Query: 688 VYILIFTRI 714
VYI+ +
Sbjct: 259 VYIIFLPAV 267
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPE
Sbjct: 189 LFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPE 248
Query: 688 VYILIFTRIWY 720
V I+ + Y
Sbjct: 249 VKIICLIILLY 259
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/60 (51%), Positives = 36/60 (60%)
Frame = +2
Query: 254 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRI 254
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 257
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 258 I*DFDSYPP 284
F PP
Sbjct: 100 NMSFWLLPP 108
Score = 33.1 bits (72), Expect = 7.8
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 361
P NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +1
Query: 601 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
N T+FFDPAGGGD IL+QHLF FFGHPEVYILI
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILI 224
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 65.3 bits (152), Expect = 2e-09
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH-- 681
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIW 260
Query: 682 PEVYILI 702
P + I+I
Sbjct: 261 PIIIIII 267
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISS 433
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +1
Query: 520 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 699
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 700 I 702
I
Sbjct: 253 I 253
Score = 40.7 bits (91), Expect = 0.039
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 314 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 63.3 bits (147), Expect = 6e-09
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = +1
Query: 568 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQV 203
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 93 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLV 301
Score = 33.1 bits (72), Expect = 7.8
Identities = 24/94 (25%), Positives = 33/94 (35%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL + +YN ++T+H
Sbjct: 70 DIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPM 129
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 284
N +PL++ A D+AFPRI F PP
Sbjct: 130 IAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPP 162
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++I
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVII 257
Score = 33.5 bits (73), Expect = 5.9
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 332 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 433
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +1
Query: 568 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMI 258
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLI 408
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 61.3 bits (142), Expect = 3e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +1
Query: 571 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLV 273
Score = 33.9 bits (74), Expect = 4.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKL 120
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/57 (52%), Positives = 33/57 (57%)
Frame = +3
Query: 510 ICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 680
ICM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 96 ICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 409
P NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +1
Query: 568 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIFTRI--WYNFSYYFT 741
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L+ I Y F+
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPRFS 264
Query: 742 RK 747
RK
Sbjct: 265 RK 266
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/65 (50%), Positives = 37/65 (56%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV + AF A LL DR+ T FF P GGD +L+QHLF FFGHPE
Sbjct: 201 LFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPE 260
Query: 688 VYILI 702
VYILI
Sbjct: 261 VYILI 265
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIFTRIWYNFSYYFTRKRK 753
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++ + SY R
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGI-ISYILPRFSG 348
Query: 754 KRNF 765
+R F
Sbjct: 349 RRLF 352
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/94 (29%), Positives = 39/94 (41%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL +PG + + YN+++T+H
Sbjct: 96 DIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPI 155
Query: 183 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 284
N L+PL++GA D+AFPRI F PP
Sbjct: 156 IAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPP 188
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 60.1 bits (139), Expect = 6e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILI
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILI 266
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 311 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP- 257
Query: 688 VYILIF 705
V ILI+
Sbjct: 258 VLILIW 263
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 245 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 424
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 425 ISS 433
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 5/50 (10%)
Frame = +1
Query: 568 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILI 702
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILV 257
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/56 (53%), Positives = 32/56 (57%)
Frame = +3
Query: 600 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFYQDLV*FLILFHKKEEKKKLW 767
K KYIIF S W F+STFILIFWT SLYFNF F F K +K LW
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLW 62
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +1
Query: 583 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILIF 705
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+F
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLF 256
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 529 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVY 693
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 694 ILI 702
I+I
Sbjct: 283 IMI 285
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 56.8 bits (131), Expect = 6e-07
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 571 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMV 273
Score = 39.5 bits (88), Expect = 0.090
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG I D YN T H N ++PL+LGA D+AFPR+
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRL 127
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 56.0 bits (129), Expect = 1e-06
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 595 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIFTRI 714
+R + FFDP GGDP+L+QHLF FGHPEVYI+ I
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLI 293
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 16 DIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVM 75
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 290
N VP+++G+PD+AFPR+ F PP L
Sbjct: 76 PAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 577 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIFTR--IWYNFSYYFTRKR 750
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILI I+ F RKR
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVIPVFARKR 274
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/65 (44%), Positives = 33/65 (50%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV TA + +R T FFD A GG P+L+Q LF FFGHPE
Sbjct: 181 LFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPE 240
Query: 688 VYILI 702
VYILI
Sbjct: 241 VYILI 245
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
+FV AV + +F A +L DR FF A GDPIL+QHLF FFGHPE
Sbjct: 206 IFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPE 264
Query: 688 VYIL 699
VYI+
Sbjct: 265 VYII 268
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI--FTRIWYNFSYYFTRK 747
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ F + + F R
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARN 264
Query: 748 R 750
R
Sbjct: 265 R 265
Score = 36.7 bits (81), Expect = 0.63
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A +L DRN T FFD A GG P+L+QHLF F HP VY+++
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVV 283
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 699
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYII 272
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/49 (57%), Positives = 32/49 (65%), Gaps = 10/49 (20%)
Frame = +1
Query: 583 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYIL 699
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIV 286
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 53.2 bits (122), Expect = 7e-06
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 583 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 699
+L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYII 288
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 52.8 bits (121), Expect = 9e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILI
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILI 267
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/71 (40%), Positives = 38/71 (53%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH +
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTD 75
Query: 688 VYILIFTRIWY 720
V LI W+
Sbjct: 76 VLFLIL--FWF 84
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+ HP
Sbjct: 202 LFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPA 261
Query: 688 VYILI 702
VYI++
Sbjct: 262 VYIMV 266
Score = 39.5 bits (88), Expect = 0.090
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 260
EL PG I D YN + T H N L+P+++GA D+AFP++ +
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 261 *DFDSY 278
F Y
Sbjct: 123 LSFYVY 128
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +1
Query: 586 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 699
+L DR L +DPA GG +L+QHLF FFGHPEVY+L
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVL 271
Score = 33.5 bits (73), Expect = 5.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 52.0 bits (119), Expect = 2e-05
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVML 257
Score = 33.5 bits (73), Expect = 5.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 699
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYII 331
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQ 657
L + A ITA A +L+ DR+L TSFF AG GG P+L+Q
Sbjct: 235 LTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQ 294
Query: 658 HLF*FFGHPEVYILIFTRIWYNFSYYFTRKRK 753
HLF F GHPEVYI++ + T RK
Sbjct: 295 HLFWFLGHPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 583 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 699
+L +R + FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYII 262
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 48.8 bits (111), Expect = 1e-04
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILY 654
L + A+ ITA A ++L DR + T FF P AGGG P+L+
Sbjct: 221 LTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLW 280
Query: 655 QHLF*FFGHPEVYILI 702
QHLF F+ HP VYI+I
Sbjct: 281 QHLFWFYSHPAVYIMI 296
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +1
Query: 583 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 699
+L +R FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYII 262
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +2
Query: 323 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 433
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 516 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 668
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/54 (50%), Positives = 31/54 (57%), Gaps = 11/54 (20%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILI 702
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI I
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAI 295
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 353 PLSSNIAHRGRSVDLAIFSLHLAGISS 433
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +1
Query: 571 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILV 292
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILI
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILI 291
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVV 310
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 574 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
A+ +L DR FF GG P+L+ +LF +GHPEVYI+I
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVI 287
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 604 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIFTRIWYNFSYYFTRKRK 753
L S F+P GG P+LYQ F F+ HP VY+++ + T RK
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVASTMARK 282
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRI 254
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 41.9 bits (94), Expect = 0.017
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 631 GGGDPILYQHLF*FFGHPEVYILI 702
GGG P+L+QHLF F+ HP VYI++
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIML 299
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 586 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
+ DR L+T F+ GG +LY +L +GHPEVYILI
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILI 286
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 41.5 bits (93), Expect = 0.022
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILY 654
+F ++ +T + A+ IL +D L T++F D G +L+
Sbjct: 194 IFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLW 253
Query: 655 QHLF*FFGHPEVYILIF 705
HLF FFGHPEVYI+ F
Sbjct: 254 AHLFWFFGHPEVYIVFF 270
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 40.3 bits (90), Expect = 0.051
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 508 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 687
LFV AV A G +LL ++ S++ GG +++++LF +FGHPE
Sbjct: 213 LFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPE 271
Query: 688 VYILIFTRIWYNFSY 732
VY+L+ F Y
Sbjct: 272 VYLLLLPGTGAMFDY 286
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 39.9 bits (89), Expect = 0.068
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 586 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 702
L DR L+ FF GG+ + + ++F FGHPEVYILI
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILI 311
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 255 II*DFDSYPPPL 290
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_Q7NIC1 Cluster: Gll2262 protein; n=2; Bacteria|Rep:
Gll2262 protein - Gloeobacter violaceus
Length = 469
Score = 36.7 bits (81), Expect = 0.63
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 670 FFGHPE-VYILIFTRIWYNFSYYFTR 744
FFGHP +Y+L FT +W FSYY R
Sbjct: 20 FFGHPVGLYVLFFTEMWERFSYYGMR 45
>UniRef50_O77308 Cluster: ABC transporter, putative; n=2;
Plasmodium|Rep: ABC transporter, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1365
Score = 35.1 bits (77), Expect = 1.9
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 688 VYILIFTRIWYNFSYYFTRKRKKRNF 765
+YI++ T ++YN+S ++ +K+KK+NF
Sbjct: 762 IYIILLTFLFYNYSKFYYKKQKKKNF 787
>UniRef50_A6EN33 Cluster: Di-/tripeptide transporter; n=2;
Bacteroidetes|Rep: Di-/tripeptide transporter -
unidentified eubacterium SCB49
Length = 520
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 673 FGHP-EVYILIFTRIWYNFSYYFTR 744
FGHP +Y+L FT +W FSYY R
Sbjct: 14 FGHPIGLYVLFFTEMWERFSYYGMR 38
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 4.5
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 634 GGDPILYQHLF*FFGHPEVYILIFTRI--WYNF 726
G DP+L + LF F GHP VY + WYNF
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNF 256
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 33.9 bits (74), Expect = 4.5
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +1
Query: 259 YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 414
+KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 84 FKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,117,710
Number of Sequences: 1657284
Number of extensions: 10031311
Number of successful extensions: 21375
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 20330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21312
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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