Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30955X
(568 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 154 1e-36
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 140 2e-32
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 132 4e-30
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 120 2e-26
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 117 2e-25
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 3e-23
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 81 2e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 5e-14
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 74 3e-12
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 73 4e-12
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 71 3e-11
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 69 8e-11
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 64 2e-09
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 64 3e-09
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 64 3e-09
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 63 4e-09
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 61 2e-08
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 57 3e-07
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 55 1e-06
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 53 4e-06
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 53 4e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 53 5e-06
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 2e-05
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 51 2e-05
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 51 2e-05
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 50 5e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 49 7e-05
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 48 1e-04
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 47 4e-04
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 46 5e-04
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 46 6e-04
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 44 0.003
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 43 0.004
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 43 0.004
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.006
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.006
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 42 0.008
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 41 0.018
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 40 0.041
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 39 0.071
UniRef50_Q6Z3M9 Cluster: Putative uncharacterized protein OSJNBa... 38 0.12
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 38 0.12
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 38 0.16
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 38 0.16
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.16
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.16
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 37 0.29
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.29
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 37 0.29
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 37 0.38
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 36 0.50
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 36 0.87
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 35 1.2
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 34 2.0
UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isof... 34 2.7
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 34 2.7
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 2.7
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 33 3.5
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 4.7
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q7UND8 Cluster: ABC transporter (ATP-binding protein)-p... 32 8.1
UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 32 8.1
UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 154 bits (374), Expect = 1e-36
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
VHFRDPY++K RKELFIAP+ +H
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMH 83
Score = 145 bits (352), Expect = 6e-34
Identities = 63/81 (77%), Positives = 74/81 (91%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D
Sbjct: 83 HTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQD 142
Query: 443 AKRTRVQLPSGAKKVLPSSNR 505
K+TRV+LPSGAKKV+PS+NR
Sbjct: 143 TKKTRVKLPSGAKKVVPSANR 163
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGR 567
+VGIVAGGGRIDKPILKAGR
Sbjct: 165 MVGIVAGGGRIDKPILKAGR 184
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 140 bits (340), Expect = 2e-32
Identities = 62/81 (76%), Positives = 73/81 (90%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+
Sbjct: 83 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPE 142
Query: 443 AKRTRVQLPSGAKKVLPSSNR 505
K+TRV+LPSG+KKV+ S+NR
Sbjct: 143 TKKTRVKLPSGSKKVISSANR 163
Score = 139 bits (337), Expect = 4e-32
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGR 567
+VG+VAGGGRIDKPILKAGR
Sbjct: 165 VVGVVAGGGRIDKPILKAGR 184
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 132 bits (320), Expect = 4e-30
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
V FRDPYK+K R E FIA + ++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMY 83
Score = 81.4 bits (192), Expect = 1e-14
Identities = 43/81 (53%), Positives = 54/81 (66%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
YTGQF+YCGKKA L++ RG+LARASGN+ATVI HNPD
Sbjct: 83 YTGQFIYCGKKANLQI------------------------RGKLARASGNYATVISHNPD 118
Query: 443 AKRTRVQLPSGAKKVLPSSNR 505
K++RV+LPSG+KKV+PS+NR
Sbjct: 119 TKKSRVKLPSGSKKVIPSANR 139
Score = 41.9 bits (94), Expect = 0.010
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAGR 567
+VGIVAGGGRIDKP+LKAGR
Sbjct: 141 IVGIVAGGGRIDKPMLKAGR 160
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 120 bits (289), Expect = 2e-26
Identities = 56/77 (72%), Positives = 64/77 (83%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 199 VHFRDPYKFKTRKELFI 249
V FR P++FK +KELF+
Sbjct: 61 VTFRHPFRFKKQKELFV 77
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 278 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 385
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 117 bits (282), Expect = 2e-25
Identities = 48/73 (65%), Positives = 62/73 (84%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
Y+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D
Sbjct: 74 YSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNAD 133
Query: 443 AKRTRVQLPSGAK 481
+ TR++LPSGAK
Sbjct: 134 NETTRIRLPSGAK 146
Score = 52.4 bits (120), Expect = 7e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 142 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPKALH 267
+G+VK I HDPGRGAPLA V FR+P ++ KELFI + L+
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLY 74
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 3e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 31 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 210
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 211 DPYKFKTRK 237
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 80.6 bits (190), Expect = 2e-14
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
Y GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A VIG P+
Sbjct: 75 YVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPE 134
Query: 443 AKRTRVQLPSGAKKVLPSSNR 505
+T ++LPSG + S R
Sbjct: 135 ENKTIIRLPSGRTVEVDSRGR 155
Score = 38.7 bits (86), Expect = 0.094
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 19 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 196 VV 201
+
Sbjct: 57 KI 58
Score = 37.9 bits (84), Expect = 0.16
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 511 VGIVAGGGRIDKPILKAGR 567
VGIVAGGGRI+KP LKAG+
Sbjct: 158 VGIVAGGGRIEKPFLKAGK 176
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 5e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 156
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
Y GQ + G A E GN++P+G +PEGT V N+E + GD G+LAR +G++A V+G
Sbjct: 75 YVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR--A 132
Query: 443 AKRTRVQLPSGAKKVLPSSNR 505
+T ++LPSG K +P+ +R
Sbjct: 133 GAKTILRLPSGKDKEVPNDSR 153
Score = 35.9 bits (79), Expect = 0.66
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 196 VVHFRDPYKF 225
V D +F
Sbjct: 57 RVVREDGVEF 66
Score = 32.7 bits (71), Expect = 6.2
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 511 VGIVAGGGRIDKPILKAG 564
+GI AG GRI+KPI+KAG
Sbjct: 156 IGIPAGAGRIEKPIMKAG 173
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 73.3 bits (172), Expect = 4e-12
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A
Sbjct: 78 GNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EAT 135
Query: 449 RTRVQLPSGAKKVL 490
RT V +PSG K L
Sbjct: 136 RTAVSMPSGNIKWL 149
Score = 35.5 bits (78), Expect = 0.87
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 496 KQQRLVGIVAGGGRIDKPILKAGR 567
K + +VGIVAG GR+D+P LKAG+
Sbjct: 152 KCRAVVGIVAGSGRVDRPWLKAGK 175
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
Y + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H+
Sbjct: 109 YLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSKY 168
Query: 443 AKRTRVQLPSGAKKVLPS 496
T+++LPS K+L S
Sbjct: 169 NNVTKLKLPSKKIKILSS 186
Score = 44.0 bits (99), Expect = 0.002
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 199 VHFRDPYKFKTRKELFIAPKALH 267
+ F FK EL+IA + L+
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLY 109
Score = 34.7 bits (76), Expect = 1.5
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +1
Query: 511 VGIVAGGGRIDKPILKAGR 567
+G+VAGGG+ +KP+LKAG+
Sbjct: 192 IGVVAGGGKYEKPLLKAGK 210
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 68.9 bits (161), Expect = 8e-11
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G +AT+I H D
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVG 138
Query: 449 RTRVQLPSG 475
RT VQLPSG
Sbjct: 139 RTYVQLPSG 147
Score = 48.8 bits (111), Expect = 9e-05
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 196 VVHFRD 213
V F D
Sbjct: 61 RVRFED 66
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G+ + G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +++G ATV H +
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG- 137
Query: 449 RTRVQLPSGAKKVLPSSNR 505
V+LPSG L NR
Sbjct: 138 -VTVKLPSGKFTTLNPKNR 155
Score = 33.1 bits (72), Expect = 4.7
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 192
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 193 AVVHFRD 213
A V F D
Sbjct: 58 AKVRFED 64
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++G + +
Sbjct: 79 YTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSGN 138
Query: 443 AKRTRVQLPSGAKKVLPSSNR 505
+ +QLPSG K + + R
Sbjct: 139 S--AIIQLPSGKVKQVNAKAR 157
Score = 32.3 bits (70), Expect = 8.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G VY GK+A +G++ P+ +PEGT + LE GD G+L RASG+FA ++ D
Sbjct: 78 GDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD-- 135
Query: 449 RTRVQLPSGAKKVLPSSNR 505
+ VQLPSG K L ++ R
Sbjct: 136 KVIVQLPSGQFKTLSANAR 154
Score = 32.3 bits (70), Expect = 8.1
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAG 564
++G++AGGGR +KP +KAG
Sbjct: 156 VIGVIAGGGRKEKPFVKAG 174
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 63.3 bits (147), Expect = 4e-09
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H +
Sbjct: 69 YTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKE 128
Query: 443 AKRTRVQLPSGAKKVLPSSNR 505
T +++PSG K + S R
Sbjct: 129 TNETVIKIPSGKKLTVSSECR 149
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 79 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 213
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKE 57
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + V+G D
Sbjct: 76 GQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD 133
Score = 42.3 bits (95), Expect = 0.008
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 196 VVHFRDPYKF 225
++ D KF
Sbjct: 56 LIKLDDGTKF 65
Score = 33.1 bits (72), Expect = 4.7
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 508 LVGIVAGGGRIDKPILKAG 564
+VG+VAGGG +KP+LKAG
Sbjct: 154 IVGVVAGGGVTEKPLLKAG 172
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + + A ++VGN P+ +PEGT++ N+E K G G++AR++G ++G + D K
Sbjct: 114 GMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGK 173
Query: 449 RTRVQLPSG-AKKVL 490
++L SG +KVL
Sbjct: 174 YVTLRLTSGEVRKVL 188
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + G K+ + GNV+ V +P+GT VCN+E+ GD G + +++G ATV H
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG- 136
Query: 449 RTRVQLPSGAKKVLPSSNR 505
++LPSG L NR
Sbjct: 137 -VVLKLPSGRFSTLNPKNR 154
Score = 35.9 bits (79), Expect = 0.66
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 196 VVHFRD 213
+ F D
Sbjct: 58 KIRFED 63
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 442
Y GQ + G T+ G + +P+G+ V N+E GD G R++G FA V+ H
Sbjct: 71 YVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH--- 127
Query: 443 AKRTRVQLPSGAKK 484
R ++LPSG+ +
Sbjct: 128 GSRVTLKLPSGSMR 141
Score = 33.1 bits (72), Expect = 4.7
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 192
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL 51
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G V G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G A ++G + K
Sbjct: 113 GMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG--KEGK 170
Query: 449 RTRVQLPSGAKKVLPSSNR 505
V+L SG +++ ++R
Sbjct: 171 YAIVRLSSGEVRLVLLTSR 189
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +2
Query: 302 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAK 481
++ GN MP+ +PEGTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 482 KVL 490
+++
Sbjct: 209 RMI 211
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 308 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKV 487
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 488 LPSSNR 505
+ S R
Sbjct: 419 IDSRCR 424
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/74 (33%), Positives = 44/74 (59%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G V G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D
Sbjct: 113 GDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQG 170
Query: 449 RTRVQLPSGAKKVL 490
++L SG ++++
Sbjct: 171 MAILRLNSGEQRLV 184
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/74 (33%), Positives = 44/74 (59%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + G + +++GN +P+ MP GT + N+E +G G+LARA+G A +I + K
Sbjct: 111 GDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGK 168
Query: 449 RTRVQLPSGAKKVL 490
++LPSG +++
Sbjct: 169 SATLKLPSGEVRLI 182
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 49.6 bits (113), Expect = 5e-05
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-GHNPDA 445
G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +I HN
Sbjct: 207 GDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN--- 263
Query: 446 KRTRVQLPSGAKKVLP 493
K ++LPSG K P
Sbjct: 264 KYAILRLPSGELKSFP 279
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 49.2 bits (112), Expect = 7e-05
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +2
Query: 302 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSG 475
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ ++L SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSG 269
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKVL 490
GN +P+ MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT++ D
Sbjct: 139 GDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGG 198
Query: 449 RTRVQLPSGAKKVL 490
V+LPSG ++++
Sbjct: 199 YCVVRLPSGEQRLV 212
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 305 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKK 484
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 485 VLPS 496
+ S
Sbjct: 353 AVDS 356
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 308 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKV 487
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 488 LPSSNR 505
+ S R
Sbjct: 381 IDSRCR 386
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEG 346
YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 49 YTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +2
Query: 305 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKK 484
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 485 VLPSSNR 505
++ S R
Sbjct: 417 LIDSRCR 423
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 299 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSG 475
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSG 292
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 43.2 bits (97), Expect = 0.004
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +2
Query: 302 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSG 475
++ G MP+ +PEGT V N+E G++AR++G++A ++G + K +QL SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSG 187
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRK 90
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 42.3 bits (95), Expect = 0.008
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +2
Query: 308 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKK 484
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + ++LPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTK 71
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 41.1 bits (92), Expect = 0.018
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = -1
Query: 388 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACV 263
T++TH + +AHNGTL S R +I+N + L+TI++L V
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGV 48
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 39.9 bits (89), Expect = 0.041
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 308 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKV 487
+GN + + +P GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 488 LPSSNR 505
+ S R
Sbjct: 180 INSQCR 185
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 39.1 bits (87), Expect = 0.071
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPS 472
G+ P+GA+P GT + LE+ G + L A+G F T++ D + VQLPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q6Z3M9 Cluster: Putative uncharacterized protein
OSJNBa0087F21.12; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0087F21.12 - Oryza sativa subsp. japonica (Rice)
Length = 159
Score = 38.3 bits (85), Expect = 0.12
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = -3
Query: 554 KIGLSIRPPPATIPTSLCCLMAEPSWLQTVAVLLYA*HQDCVQSQWRSFQRHVPDDLYHP 375
++ L++ P T+PTS+C A PSW+ T A++ + S R Q H+ DL+ P
Sbjct: 15 ELALAMARLPTTMPTSICGFAASPSWIHTDAIV-----DGIISSSIRCAQLHLDLDLHCP 69
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 38.3 bits (85), Expect = 0.12
Identities = 27/100 (27%), Positives = 40/100 (40%)
Frame = +2
Query: 200 YTSAIHTXXXXXXXXXXXXXXYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 379
Y S +H G + G A VGN P MP GT++ +E G
Sbjct: 90 YISPVHHGDGDKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPG 149
Query: 380 DRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKVLPSS 499
G+ ARA+G A + + +R LP G + +P +
Sbjct: 150 KGGQSARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQN 187
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 37.9 bits (84), Expect = 0.16
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 335 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKVL 490
MP GT + N+E +G G+LARA+G A +I + K ++LPSG +++
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLI 52
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 37.9 bits (84), Expect = 0.16
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = -1
Query: 505 SVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSN 326
S + W NLL R L IR+V++ + ++ + TSIT+ +F + GT +
Sbjct: 71 SASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRAQ 130
Query: 325 RHHISNFKSCFLSTINKLACV 263
++ + FL+ N+LA V
Sbjct: 131 GQNVIGNEGGFLTAANELARV 151
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.16
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 427
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.16
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 290 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 433
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 37.1 bits (82), Expect = 0.29
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 388 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACV 263
T +TH + +AHNGTL S R +I+N + L+ +++L V
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGV 60
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 37.1 bits (82), Expect = 0.29
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKVL 490
GN +P+ +P GT+V N+ +M R++G +AT+I + + ++ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 37.1 bits (82), Expect = 0.29
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++ +
Sbjct: 119 GSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVAKEGEYA 178
Query: 449 RTRVQ 463
R++
Sbjct: 179 TLRMR 183
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 36.7 bits (81), Expect = 0.38
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPS 472
G+ P+GA+P GT + LE+ G L A+G F T++ ++ VQLPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 36.3 bits (80), Expect = 0.50
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 46 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 222
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 35.5 bits (78), Expect = 0.87
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G + G KA L++GN +P+ + G+ + N+E + +G L + + N +I D
Sbjct: 104 GSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIY 162
Query: 449 RTRVQLPSGAKKVL 490
T V+LPSG K+L
Sbjct: 163 VT-VKLPSGEIKLL 175
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 35.1 bits (77), Expect = 1.2
Identities = 23/91 (25%), Positives = 46/91 (50%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 448
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 449 RTRVQLPSGAKKVLPSSNRGWSVLLLEVDVL 541
++LPSG ++L N+ +L E++++
Sbjct: 167 YVTIKLPSGEIRLL---NKNVFCILGELNII 194
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 34.3 bits (75), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVQLP 469
GN P+G++ GT++ ++E D +A+G AT++ H D T V+LP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isoform
N2-A; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to titin isoform N2-A - Strongylocentrotus
purpuratus
Length = 10984
Score = 33.9 bits (74), Expect = 2.7
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 320 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKVLPSS 499
+P+ P T+ ++EK D GR +AS + + N DA+RT SG + S+
Sbjct: 8790 VPISGTPTPTVAWLMDEKQVDDGRRIKASTTTYSAVLTNKDARRT----DSGTYTIKISN 8845
Query: 500 NRGWSVLLLEVDVL 541
G + V VL
Sbjct: 8846 KAGTDTATIRVAVL 8859
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 33.9 bits (74), Expect = 2.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 427
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 33.9 bits (74), Expect = 2.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 427
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 164 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 33.5 bits (73), Expect = 3.5
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 335 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSG 475
+P GTI+ N+ + + +++GNFA +I D + +++LPSG
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.1 bits (72), Expect = 4.7
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 311 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 427
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 32.7 bits (71), Expect = 6.2
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 356 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVQLPSGAKKVL 490
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q7UND8 Cluster: ABC transporter (ATP-binding
protein)-putative sodium extrusion ABC transporter; n=3;
Planctomycetaceae|Rep: ABC transporter (ATP-binding
protein)-putative sodium extrusion ABC transporter -
Rhodopirellula baltica
Length = 273
Score = 32.3 bits (70), Expect = 8.1
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 436 IVSNH-SGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVE 260
I S H EV R C +I H +I +GTL +RH NF+ F S +++ E
Sbjct: 191 IFSTHIMSEVER-LCDRIAIMH-RGRILDSGTLNELVDRHEEENFEELFFSLLSEHETAE 248
Query: 259 PSEQ 248
+EQ
Sbjct: 249 TNEQ 252
>UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep:
MAP4K1 protein - Bos taurus (Bovine)
Length = 847
Score = 32.3 bits (70), Expect = 8.1
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 79 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRDP 216
KKR A K+ + + G +G++ D++ +PG+GAP+ + DP
Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335
>UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 348
Score = 32.3 bits (70), Expect = 8.1
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 423 TVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVA 295
+VA PEA A P SP+FS R+ P P TFP S+++
Sbjct: 3 SVAYEPEALAFDP-SPLFSQRVQRWEPGASKPNPDTFPFSKIS 44
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,859,406
Number of Sequences: 1657284
Number of extensions: 12792283
Number of successful extensions: 36626
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 35374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36622
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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