Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30953X
(379 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 81 9e-16
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 81 9e-16
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 81 9e-16
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 81 9e-16
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 81 9e-16
AB083591-1|BAB89304.1| 233|Homo sapiens putative G-protein coup... 29 6.6
Z95326-1|CAI20271.2| 408|Homo sapiens solute carrier family 35,... 28 8.8
BX640761-1|CAE45867.1| 228|Homo sapiens hypothetical protein pr... 28 8.8
BC114925-1|AAI14926.1| 408|Homo sapiens SLC35F1 protein protein. 28 8.8
BC028615-1|AAH28615.1| 408|Homo sapiens solute carrier family 3... 28 8.8
AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic fact... 28 8.8
AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic fact... 28 8.8
AL449196-1|CAI16177.2| 408|Homo sapiens solute carrier family 3... 28 8.8
AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic fact... 28 8.8
AL136478-1|CAM28261.1| 408|Homo sapiens solute carrier family 3... 28 8.8
AL133379-1|CAI19872.2| 408|Homo sapiens solute carrier family 3... 28 8.8
AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens ... 28 8.8
AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitami... 28 8.8
AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12 re... 28 8.8
AB209880-1|BAD93117.1| 1327|Homo sapiens cubilin variant protein. 28 8.8
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 81.4 bits (192), Expect = 9e-16
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +3
Query: 114 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELGKK 266
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 263 KGLIKQVVQHHGQVIYTRATKGDDPVA 343
KGLIK V +H QVIYTR TKG D A
Sbjct: 94 KGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 9e-16
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +3
Query: 114 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELGKK 266
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 263 KGLIKQVVQHHGQVIYTRATKGDDPVA 343
KGLIK V +H QVIYTR TKG D A
Sbjct: 94 KGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 9e-16
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +3
Query: 114 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELGKK 266
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 263 KGLIKQVVQHHGQVIYTRATKGDDPVA 343
KGLIK V +H QVIYTR TKG D A
Sbjct: 94 KGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 9e-16
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +3
Query: 114 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELGKK 266
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 263 KGLIKQVVQHHGQVIYTRATKGDDPVA 343
KGLIK V +H QVIYTR TKG D A
Sbjct: 94 KGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 9e-16
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +3
Query: 114 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELGKK 266
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 263 KGLIKQVVQHHGQVIYTRATKGDDPVA 343
KGLIK V +H QVIYTR TKG D A
Sbjct: 94 KGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>AB083591-1|BAB89304.1| 233|Homo sapiens putative G-protein coupled
receptor protein.
Length = 233
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 246 VLFSPGNLGPLIFQIRQQV*LACTVGLPCTVSHM-WVYQTTP 124
+L SP I + L CT+GL C+ SH+ W+ T P
Sbjct: 181 LLLSPAGTSCYISLLGALAFLPCTLGLGCSFSHVGWLLWTQP 222
>Z95326-1|CAI20271.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 214 NLSDTTAGVISLYCGTSLYSFSYVGL 137
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>BX640761-1|CAE45867.1| 228|Homo sapiens hypothetical protein
protein.
Length = 228
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 214 NLSDTTAGVISLYCGTSLYSFSYVGL 137
NLS TA + SL+CG L+ + + GL
Sbjct: 133 NLSLLTADLYSLFCGLFLFHYKFSGL 158
>BC114925-1|AAI14926.1| 408|Homo sapiens SLC35F1 protein protein.
Length = 408
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 214 NLSDTTAGVISLYCGTSLYSFSYVGL 137
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>BC028615-1|AAH28615.1| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 214 NLSDTTAGVISLYCGTSLYSFSYVGL 137
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 352 HSLCDWIIALG-RTRVDHLPMMLDYLFDETFFPNSMSALLAREPRTFNLSDTTAGVISLY 176
H+ C WI+A TR+ + + FD PN S L D+ A ++S +
Sbjct: 2244 HADCIWILAAPPETRIQ---LQFEDRFDIEVTPNCTSNYLELRDGV----DSDAPILSKF 2296
Query: 175 CGTSLYS 155
CGTSL S
Sbjct: 2297 CGTSLPS 2303
>AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 352 HSLCDWIIALG-RTRVDHLPMMLDYLFDETFFPNSMSALLAREPRTFNLSDTTAGVISLY 176
H+ C WI+A TR+ + + FD PN S L D+ A ++S +
Sbjct: 2244 HADCIWILAAPPETRIQ---LQFEDRFDIEVTPNCTSNYLELRDGV----DSDAPILSKF 2296
Query: 175 CGTSLYS 155
CGTSL S
Sbjct: 2297 CGTSLPS 2303
>AL449196-1|CAI16177.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 214 NLSDTTAGVISLYCGTSLYSFSYVGL 137
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic
factor-cobalamin receptor) protein.
Length = 3623
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 352 HSLCDWIIALG-RTRVDHLPMMLDYLFDETFFPNSMSALLAREPRTFNLSDTTAGVISLY 176
H+ C WI+A TR+ + + FD PN S L D+ A ++S +
Sbjct: 2244 HADCIWILAAPPETRIQ---LQFEDRFDIEVTPNCTSNYLELRDGV----DSDAPILSKF 2296
Query: 175 CGTSLYS 155
CGTSL S
Sbjct: 2297 CGTSLPS 2303
>AL136478-1|CAM28261.1| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 214 NLSDTTAGVISLYCGTSLYSFSYVGL 137
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>AL133379-1|CAI19872.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 214 NLSDTTAGVISLYCGTSLYSFSYVGL 137
NLS TA + SL+CG L+ + + GL
Sbjct: 313 NLSLLTADLYSLFCGLFLFHYKFSGL 338
>AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39715 fis, clone SMINT2013228. ).
Length = 120
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 174 VGLPCTVSHMWVYQTTPGCSTCH 106
+GL T +H W Y+ P CS C+
Sbjct: 20 LGLLHTHTHTWYYRCEPTCSACY 42
>AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitamin B12
receptor protein.
Length = 3494
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 352 HSLCDWIIALG-RTRVDHLPMMLDYLFDETFFPNSMSALLAREPRTFNLSDTTAGVISLY 176
H+ C WI+A TR+ + + FD PN S L D+ A ++S +
Sbjct: 2115 HADCIWILAAPPETRIQ---LQFEDRFDIEVTPNCTSNYLELRDGV----DSDAPILSKF 2167
Query: 175 CGTSLYS 155
CGTSL S
Sbjct: 2168 CGTSLPS 2174
>AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12
receptor precursor protein.
Length = 3623
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 352 HSLCDWIIALG-RTRVDHLPMMLDYLFDETFFPNSMSALLAREPRTFNLSDTTAGVISLY 176
H+ C WI+A TR+ + + FD PN S L D+ A ++S +
Sbjct: 2244 HADCIWILAAPPETRIQ---LQFEDRFDIEVTPNCTSNYLELRDGV----DSDAPILSKF 2296
Query: 175 CGTSLYS 155
CGTSL S
Sbjct: 2297 CGTSLPS 2303
>AB209880-1|BAD93117.1| 1327|Homo sapiens cubilin variant protein.
Length = 1327
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 352 HSLCDWIIALG-RTRVDHLPMMLDYLFDETFFPNSMSALLAREPRTFNLSDTTAGVISLY 176
H+ C WI+A TR+ + + FD PN S L D+ A ++S +
Sbjct: 950 HADCIWILAAPPETRIQ---LQFEDRFDIEVTPNCTSNYLELRDGV----DSDAPILSKF 1002
Query: 175 CGTSLYS 155
CGTSL S
Sbjct: 1003 CGTSLPS 1009
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,479,188
Number of Sequences: 237096
Number of extensions: 1404776
Number of successful extensions: 2981
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2965
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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