Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30952X
         (473 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-...   132   5e-30
UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-...    75   8e-13
UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1...    71   1e-11
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu...    67   2e-10
UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T ...    65   9e-10
UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding prot...    45   0.001
UniRef50_Q94C44 Cluster: Hydroxyproline-rich glycoprotein VSP4; ...    35   1.1  
UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein...    33   2.4  
UniRef50_Q8KBB3 Cluster: Putative uncharacterized protein; n=6; ...    32   5.6  
UniRef50_Q8SZI7 Cluster: HL03512p; n=1; Drosophila melanogaster|...    32   5.6  
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu...    32   7.4  
UniRef50_A6G7G0 Cluster: Putative uncharacterized protein; n=2; ...    31   9.8  
UniRef50_Q0UVT2 Cluster: Putative uncharacterized protein; n=1; ...    31   9.8  

>UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-12
           precursor; n=5; Bombyx mori|Rep: Low molecular 30 kDa
           lipoprotein PBMHP-12 precursor - Bombyx mori (Silk moth)
          Length = 264

 Score =  132 bits (318), Expect = 5e-30
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = -1

Query: 254 FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF 78
           FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF
Sbjct: 206 FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF 264



 Score = 61.7 bits (143), Expect = 8e-09
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -2

Query: 340 KMSTTTCNCNSRDRVVYGGNSADSTREQ 257
           KMST+TCNCN+RDRVVYGGNSADSTREQ
Sbjct: 177 KMSTSTCNCNARDRVVYGGNSADSTREQ 204


>UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-6
           precursor; n=2; Bombyx mori|Rep: Low molecular 30 kDa
           lipoprotein PBMHP-6 precursor - Bombyx mori (Silk moth)
          Length = 256

 Score = 74.9 bits (176), Expect = 8e-13
 Identities = 26/59 (44%), Positives = 45/59 (76%)
 Frame = -1

Query: 254 FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF 78
           + +P+ YE+DV+FF+YNR++N  + L   + A+ DR+A+GH GEV+G P +++W+I P+
Sbjct: 198 YLEPSMYESDVMFFVYNREYNSVMTLDEDMAANEDREALGHSGEVSGYPQLFAWYIVPY 256


>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
           precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
           kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
          Length = 256

 Score = 71.3 bits (167), Expect = 1e-11
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = -1

Query: 254 FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF 78
           + QPAKY+NDVLF+IYNR+++ AL L   V  SG R A G++G V G P+ Y+W I  F
Sbjct: 198 YLQPAKYDNDVLFYIYNREYSKALTLSRTVEPSGHRMAWGYNGRVIGSPEHYAWGIKAF 256


>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
           sexta|Rep: Microvitellogenin precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 249

 Score = 67.3 bits (157), Expect = 2e-10
 Identities = 26/59 (44%), Positives = 42/59 (71%)
 Frame = -1

Query: 254 FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF 78
           + QPAK + +++FFI NR++N AL+LG  V++ GDR+  GH+G V G P+++ W +  F
Sbjct: 191 YLQPAKADGNLVFFIVNREYNHALKLGRSVDSMGDRQVWGHNGNVIGNPELFGWSVVAF 249


>UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T -
           Bombyx mori (Silk moth)
          Length = 267

 Score = 64.9 bits (151), Expect = 9e-10
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -1

Query: 254 FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFIT 84
           +  P + EN VLF+IYNRQ++ AL+LG  V++ GDR+A      V G P++Y+W I+
Sbjct: 208 YLNPVELENQVLFYIYNRQYDQALKLGRNVDSDGDRRAYSSSSSVEGQPELYAWSIS 264


>UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding
           protein; n=1; Bombyx mori|Rep: Putative paralytic
           peptide-binding protein - Bombyx mori (Silk moth)
          Length = 436

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = -1

Query: 254 FFQPAKYENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF 78
           +  P K  +  LF I NR++   L+L   V+  GDR   G++G VA  P+ Y + I P+
Sbjct: 377 YLYPVKVGDQQLFLIENREYRQGLKLDANVDRYGDRLVWGNNGTVADNPEYYGFIIQPW 435


>UniRef50_Q94C44 Cluster: Hydroxyproline-rich glycoprotein VSP4;
           n=1; Chlamydomonas reinhardtii|Rep: Hydroxyproline-rich
           glycoprotein VSP4 - Chlamydomonas reinhardtii
          Length = 991

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -2

Query: 460 CLLPKQLHEHTDAWSSC-ERCRAAMPCPSIGSNVLEP 353
           CLL K  H    AW  C + C AA P PS G  V  P
Sbjct: 884 CLLAKGSHRLGAAWDYCLDNCNAASPAPSTGGAVTYP 920


>UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein;
           n=1; Mythimna separata|Rep: Growth blocking peptide
           binding protein - Pseudaletia separata (Oriental
           armyworm) (Mythimna separata)
          Length = 430

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -1

Query: 236 YENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFIT 84
           +   ++FFI N ++   L+L    +  GDR   GH+G V    + + W I+
Sbjct: 378 HNGTLVFFIINYKYGQGLKLDASTDDIGDRLLWGHNGTVYNEYERFRWIIS 428


>UniRef50_Q8KBB3 Cluster: Putative uncharacterized protein; n=6;
           Chlorobiaceae|Rep: Putative uncharacterized protein -
           Chlorobium tepidum
          Length = 485

 Score = 32.3 bits (70), Expect = 5.6
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = -2

Query: 472 PLSHCLLPKQLHEHTDAWSSCERCRAAMPCPSIGSNVLEPSLSSKMSTTTCNCNSRDR 299
           PL+HCL      E    W SC R    M C ++   +L P+L  +M T   N +S  R
Sbjct: 101 PLNHCLPEFLRGELQTLWDSCSRHAREMGCQTLMVGIL-PTLQDRMLTLQ-NMSSMQR 156


>UniRef50_Q8SZI7 Cluster: HL03512p; n=1; Drosophila
           melanogaster|Rep: HL03512p - Drosophila melanogaster
           (Fruit fly)
          Length = 71

 Score = 32.3 bits (70), Expect = 5.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 381 GHGIAARQRSHDDQASVCSCNCLGNKQCE 467
           GHG  A  R   D  S CSC C+  +  E
Sbjct: 13  GHGSQAADRRQQDNLSTCSCQCISQEHFE 41


>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
           organisms|Rep: ATP synthase subunit beta - Gluconobacter
           oxydans (Gluconobacter suboxydans)
          Length = 487

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 57  NSVFGRLERCNEPRVDVRKTGDFTIVSNGLAVSRGVH 167
           N+V GR+ +   P VDV+  GD   + N L V  G H
Sbjct: 13  NNVVGRVTQVRGPVVDVQFEGDLPFILNALHVQNGDH 49


>UniRef50_A6G7G0 Cluster: Putative uncharacterized protein; n=2;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 676

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 54  YNSVFGRLERCNEPRVDVRKTGDFTIVSNGLAVSRGVHDRTE 179
           Y  +F RLE    PR D++   DFT  S     S  +H R E
Sbjct: 248 YGDIFARLEDAGVPRADLQLAWDFTTASEADNASWLLHMRDE 289


>UniRef50_Q0UVT2 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 608

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 109 GRPATSPSCPTALRSPEAFTIVPSSKASLNWRL 207
           GR  + PS PTA  SPE F+  P   ++L  R+
Sbjct: 19  GRGPSRPSSPTASTSPEIFSFAPRGPSTLQSRI 51


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,141,840
Number of Sequences: 1657284
Number of extensions: 7164754
Number of successful extensions: 23873
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23867
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)