Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30952X
         (473 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0656 + 24011784-24011844,24012737-24012862,24014761-24016052     31   0.63 
06_03_1274 + 28897491-28897707,28897804-28897935,28898029-288980...    28   3.3  
03_02_0875 + 12038365-12039329,12039417-12039593,12039651-120398...    28   3.3  
08_01_0955 + 9478018-9478773                                           27   5.8  
09_03_0148 + 12770010-12770266,12772172-12772314,12773214-127735...    27   7.7  
02_03_0224 - 16577234-16577494,16577798-16577996,16578069-165781...    27   7.7  

>01_05_0656 + 24011784-24011844,24012737-24012862,24014761-24016052
          Length = 492

 Score = 30.7 bits (66), Expect = 0.63
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 424 AWSSCERCRAAMPCPSIGSNVLEPSLSSKMSTTTCN 317
           +W  CE C A  PC +    + +P+ SS  +   C+
Sbjct: 172 SWVQCEPCPAPSPCHAHAGALFDPAASSTYAAFNCS 207


>06_03_1274 +
           28897491-28897707,28897804-28897935,28898029-28898096,
           28898216-28898280,28898468-28898534,28898630-28898917,
           28898995-28899102,28899236-28899487,28899918-28899997,
           28900092-28900185,28900728-28900810,28901319-28901873,
           28902085-28902616
          Length = 846

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 236 YENDVLFFIYNRQFNDALELGTIVNASGDRKAVGHDGEVAGLPD 105
           Y   V FF YN+ F+  + + T+V  +G+  ++G  G +  L D
Sbjct: 764 YSGSVGFFSYNKTFDLNIVIRTVVLHNGE-ASIGAGGAIVALSD 806


>03_02_0875 +
           12038365-12039329,12039417-12039593,12039651-12039893,
           12040045-12040124,12040242-12040508,12040599-12040710,
           12040757-12041071,12041357-12041366
          Length = 722

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -2

Query: 382 PSIGSNVLEPSLSSKMSTTTCNCNSRDRVVYGGNSADSTRE 260
           P   + V  P  S+     +C   S  +VV GGN ADS  E
Sbjct: 565 PGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGE 605


>08_01_0955 + 9478018-9478773
          Length = 251

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
 Frame = -2

Query: 466 SHCLLPKQLHEHTDAWSSCERCRAAMPCPSIGSNVLEP--SLSSKMSTTTCNCNSRDR 299
           +HC L      H  A +      A  PC   GS    P  + +   +   C C SR R
Sbjct: 62  THCALAAPTLRHPPAVTPSSATPATAPCAGAGSTTTAPPAAWTCTRAAPRCRCPSRCR 119


>09_03_0148 +
           12770010-12770266,12772172-12772314,12773214-12773596,
           12773895-12773971,12774061-12774211
          Length = 336

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 435 SIQTPGRRVNAAGPRCRVPLSV 370
           S+  P RR+ A GPRC + LS+
Sbjct: 96  SLAPPRRRLVARGPRCSMSLSI 117


>02_03_0224 -
           16577234-16577494,16577798-16577996,16578069-16578139,
           16578442-16578517,16578632-16578762,16578853-16578978,
           16579075-16579248,16579414-16579484,16579752-16579923,
           16581780-16581892,16582705-16582779,16582913-16583009,
           16583448-16583534,16583535-16583589,16583650-16583828
          Length = 628

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +3

Query: 204 IVDEEQDVVFVLGGLEEHCSLVLSALL 284
           + DE+   +F++  L E+C+LV+SA +
Sbjct: 263 LTDEDVMAIFLIEDLTENCTLVISAYI 289


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,496,409
Number of Sequences: 37544
Number of extensions: 205962
Number of successful extensions: 703
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)