Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30952X
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   0.95 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   3.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   6.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.9  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 24  NARLLHYS*TYNSVFGRLER 83
           N   +HY+  Y+S++GR +R
Sbjct: 592 NQAAIHYNLPYSSLYGRFKR 611


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 81  RCNEPRVDVRKTGDFTIVSNGLAVSRG 161
           +CN+ + D+ +TG      +G   SRG
Sbjct: 67  QCNDKKTDIEETGRGKGRGHGKGGSRG 93


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 264 GSNVLPARQVRKRR 223
           G+  +P R++RKRR
Sbjct: 257 GTTTIPTRRLRKRR 270


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 382 PSIGS-NVLEPSLSSKMSTTTCNCNSRDRVVY 290
           P+ G+ N+L PS+   + +    C  R R +Y
Sbjct: 357 PNDGNGNILSPSIHDNICSNGWICEHRWRQIY 388


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
          protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 94 GSLHLSKRPKTLLYVHE*CNKRAF 23
          G L+L  RP   +YV +  NK AF
Sbjct: 7  GILYLFDRPSEPVYVPKGDNKVAF 30


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 236 YENDVLFFIYNRQFNDA 186
           Y+N +++ IY R F D+
Sbjct: 27  YKNALVYQIYPRSFQDS 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,976
Number of Sequences: 438
Number of extensions: 2160
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)