Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30951X
(461 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 143 6e-35
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 143 6e-35
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 143 6e-35
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 143 6e-35
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 142 1e-34
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 142 1e-34
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 136 9e-33
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 87 5e-18
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 85 2e-17
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 85 2e-17
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 84 4e-17
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 84 5e-17
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 84 5e-17
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 84 5e-17
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 82 2e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 82 2e-16
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 50 6e-07
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 50 8e-07
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 1.5
At3g10650.1 68416.m01281 expressed protein 29 2.0
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 29 2.0
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 29 2.0
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 28 2.7
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 28 2.7
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 28 2.7
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 28 2.7
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 4.7
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 27 4.7
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 4.7
At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family pr... 27 6.2
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 27 8.2
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 27 8.2
At4g38040.1 68417.m05373 exostosin family protein contains Pfam ... 27 8.2
At3g19350.1 68416.m02455 polyadenylate-binding protein-related /... 27 8.2
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 27 8.2
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 8.2
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 8.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 143 bits (346), Expect = 6e-35
Identities = 66/78 (84%), Positives = 70/78 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLA 459
TIGKEIVDL LDRIRKLA
Sbjct: 109 TIGKEIVDLCLDRIRKLA 126
Score = 126 bits (303), Expect = 1e-29
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+ +GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 143 bits (346), Expect = 6e-35
Identities = 66/78 (84%), Positives = 70/78 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLA 459
TIGKEIVDL LDRIRKLA
Sbjct: 109 TIGKEIVDLCLDRIRKLA 126
Score = 126 bits (303), Expect = 1e-29
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+ +GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 143 bits (346), Expect = 6e-35
Identities = 66/78 (84%), Positives = 70/78 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLA 459
TIGKEIVDL LDRIRKLA
Sbjct: 109 TIGKEIVDLCLDRIRKLA 126
Score = 127 bits (306), Expect = 4e-30
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+ +GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 143 bits (346), Expect = 6e-35
Identities = 66/78 (84%), Positives = 70/78 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLA 459
TIGKEIVDL LDRIRKLA
Sbjct: 109 TIGKEIVDLCLDRIRKLA 126
Score = 127 bits (306), Expect = 4e-30
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+ +GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 142 bits (344), Expect = 1e-34
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLA 459
T+GKEIVDL LDR+RKLA
Sbjct: 109 TVGKEIVDLCLDRVRKLA 126
Score = 108 bits (260), Expect = 2e-24
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAG+ +GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 142 bits (344), Expect = 1e-34
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLA 459
T+GKEIVDL LDR+RKLA
Sbjct: 109 TVGKEIVDLCLDRVRKLA 126
Score = 108 bits (260), Expect = 2e-24
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAG+ +GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 136 bits (328), Expect = 9e-33
Identities = 60/78 (76%), Positives = 69/78 (88%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F SG+HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLA 459
T+G+EIVD L+R+RKLA
Sbjct: 109 TVGREIVDTCLERLRKLA 126
Score = 105 bits (252), Expect = 1e-23
Identities = 42/63 (66%), Positives = 50/63 (79%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAG+ +GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 87.0 bits (206), Expect = 5e-18
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 117 LDVVRKEA 124
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQ 187
MRE + + GQ G IG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 117 LDVVRKEA 124
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G IG+ WE+ LEHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 85.4 bits (202), Expect = 2e-17
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 118 LDVVRKEA 125
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTD 199
MRE + V GQ G IG+ WE+ C EHG+ P G+ D
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD 39
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 84.2 bits (199), Expect = 4e-17
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 117 LDVVRKEA 124
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQ 187
MRE + + GQ G IG WE+ C EHGI G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGR 35
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.8 bits (198), Expect = 5e-17
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 117 LDVVRKEA 124
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE + + GQ G IG WE+ C EHGI GQ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL 42
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.8 bits (198), Expect = 5e-17
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 117 LDVVRKEA 124
Score = 40.7 bits (91), Expect = 5e-04
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G IG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.8 bits (198), Expect = 5e-17
Identities = 34/68 (50%), Positives = 50/68 (73%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 118 LDVVRKEA 125
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
MRE + + GQ G IG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNE 54
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.8 bits (193), Expect = 2e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 117 LDVVRKEA 124
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G IG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 263 TYP 271
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 81.8 bits (193), Expect = 2e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLA 459
LD +RK A
Sbjct: 117 LDVVRKEA 124
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 83 MRECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G IG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 263 TYP 271
P
Sbjct: 59 FVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 408
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 409 IGKEIVDLVLDRIRKLA 459
GK + + ++D I + A
Sbjct: 111 -GKGVEEEIMDMIDREA 126
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 86 RECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 241
RE I++ VGQ G IG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 50.0 bits (114), Expect = 8e-07
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 408
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 409 IGKEIVDLVLDRIRKLA 459
GK + + ++D I + A
Sbjct: 111 -GKGVEEEIMDMIDREA 126
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 86 RECISVHVGQAGVHIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 241
RE I++ VGQ G IG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 258 ATPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPM 127
A PVS L +SPP +W SGW P +P+
Sbjct: 99 APPVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 28.7 bits (61), Expect = 2.0
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +3
Query: 45 NSTFKHRKKLKSKCVSASLYTLAKPESTSVMPAGSFTAWSTASSL---MARCPQTRPSGV 215
+S F +R K + SL T KP + G T S S MAR P +RP
Sbjct: 260 DSVFLNRTPFPQKSPTMSLVT--KPSGQRPLENGFVTPRSRGRSAVYSMARTPYSRPQSS 317
Query: 216 ETILSTLSSARPEWQARTP 272
I S ++ +W+ P
Sbjct: 318 VKIGSLFQASPSKWEESLP 336
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 63 RKKLKSKCVSASL---YTLAKPESTSVMPAGSFTAWSTASSLMARCPQTRPSGVETILST 233
++++K+ CV+ L T+ P+ + P AW S+ P +ETI
Sbjct: 101 KERMKTGCVALVLCLNITVDPPDVIKISPCARIEAWIDPFSMAP------PKALETIGKN 154
Query: 234 LSSARPEWQAR 266
LS+ WQ R
Sbjct: 155 LSTQYERWQPR 165
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 92 CISVHVGQAGVHIGNACWELYCLEHGIQ 175
C+ + + AG+H WE CL H IQ
Sbjct: 569 CLGITMLLAGMHCLYTLWEFMCLGHSIQ 596
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 247 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDVDSGLANVYRDALTHFD 77
+A+ V R V T +G + +DA++QA KLP I V G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 247 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDVDSGLANVYRDALTHFD 77
+A+ V R V T +G + +DA++QA KLP I V G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 247 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDVDSGLANVYRDALTHFD 77
+A+ V R V T +G + +DA++QA KLP I V G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 247 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDVDSGLANVYRDALTHFD 77
+A+ V R V T +G + +DA++QA KLP I V G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 4.7
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 451 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 362
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 27.5 bits (58), Expect = 4.7
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -2
Query: 271 GVRACHSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---VDSG-LANV 104
G + +SG + E + ++ D + H A DA+++ T +D G ANV
Sbjct: 754 GWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGSAANV 813
Query: 103 YRDALTHF 80
YR LTHF
Sbjct: 814 YRIVLTHF 821
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 4.7
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 451 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 362
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 1021
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 318 ADLINNSRFKIDEDSTGYVLATPVSLKKVLKESSPPPMVLSV 193
A ++ R +D S G L P +KK+L +SSP ++L +
Sbjct: 749 AKMVGRPRLAVDLVSKG--LLDPNRMKKLLNQSSPREVILDI 788
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 276 STGYVLATPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSR 157
+T AT +L K +P P+ LS I SGW+PC++
Sbjct: 131 ATSLYSATCFALGKY-GNGNPYPINLSAIIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 276 STGYVLATPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSR 157
+T AT +L K +P P+ LS I SGW+PC++
Sbjct: 131 ATSLYSATCFALGKY-GNGNPYPINLSAIIGLSGWLPCAK 169
>At4g38040.1 68417.m05373 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 425
Score = 26.6 bits (56), Expect = 8.2
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 271 GVRACH-SGLAEESVERIVSTPDGLV--CGHLAIRLDAVLQAVKLPAGITDVDS 119
GVRA S L ++ R+V +P V H + L VLQ LPAG DV++
Sbjct: 208 GVRAFEGSPLLIKNTIRVVCSPSYNVGFIPHKDVALPQVLQPFALPAGGNDVEN 261
>At3g19350.1 68416.m02455 polyadenylate-binding protein-related /
PABP-related similar to poly(A)-binding protein [Cucumis
sativus] GI:7528270; contains Pfam profile PF00658:
Poly-adenylate binding protein, unique domain
Length = 103
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 369 LTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLATPVSLKKVLKES 220
L LF+M + A I ++D+D ++L TP + K+++KE+
Sbjct: 34 LIGETLFFMVEELEPQFAPKITGMILELDQDKVLHLLVTPKAFKEMVKEA 83
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 306 NNSRFKIDEDSTGYVLATPVSLKKVLKESSPPPM 205
N R K S+ L PV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 318 HWHIQTVVSSRTTYYW*GR 374
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 318 HWHIQTVVSSRTTYYW*GR 374
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,565,235
Number of Sequences: 28952
Number of extensions: 223351
Number of successful extensions: 742
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 772134480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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