Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30950
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   2.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   2.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    19   8.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    19   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 166 HFCSIFMLFPLTIHWLFR*TDSKQITNLNKIK 261
           +FC  F++FP   +  F     K    LN ++
Sbjct: 300 YFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVR 331


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 178 IFMLFPLTIHWLFR 219
           +FML  L  HWL R
Sbjct: 142 VFMLIALGEHWLSR 155


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 178 IFMLFPLTIHWLFR 219
           +FML  L  HWL R
Sbjct: 142 VFMLIALGEHWLSR 155


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 112 LPEDYNPDDFSAFNSA 159
           +PED NPD  +  N A
Sbjct: 43  VPEDINPDLCTHINYA 58


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase
          like protein E1 protein.
          Length = 139

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 33 RFRKSQQNENGKGFGQAVLQGD 98
          RF+  Q  EN  G   A  +GD
Sbjct: 15 RFKAPQPPENWTGVLDATKEGD 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,224
Number of Sequences: 336
Number of extensions: 718
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)