Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30948X
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   2.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   3.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   6.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   6.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         20   6.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   6.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 211 RISCFVSGSPTTCSYMVEHEAQVIVSGARRSNIEFFVQ 324
           RI+C   G+    S  V+H  Q +  G   SN   F++
Sbjct: 634 RITCEKCGNKIDTSLFVDHIRQCVGGGTIGSNQRNFLK 671


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 176 IVPTSIFHNNKKGYPVLSRAHQQLVVTW*NMKHRL*LVVLEDPTLNSSYS 325
           I P   F  N+K YP L++ +  L++    +K    +  L+D  L S Y+
Sbjct: 27  ITPWYDFPTNQKYYPSLAKCYACLLMV---VKILWVIYWLQDDALKSVYA 73


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 147 LFTTSCDGRSADNSKTTPTRLSQSRRS 67
           LFT + DG++   + T  T++   R+S
Sbjct: 233 LFTYTDDGKNQQRTGTELTKMRPKRQS 259


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 8   EDDEEEKAWNEPWYWWSKFH 67
           +DD+EE    + + W  K H
Sbjct: 199 DDDDEETGDRQIYPWMRKVH 218


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 8   EDDEEEKAWNEPWYWWSKFH 67
           +DD+EE    + + W  K H
Sbjct: 199 DDDDEETGDRQIYPWMRKVH 218


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -2

Query: 187 CWYDNRFY 164
           C+Y+N+FY
Sbjct: 673 CFYENKFY 680


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 111 NSKTTPTRLSQSRRSWN 61
           NSK+ P + SQSR   N
Sbjct: 195 NSKSLPRQYSQSRGRHN 211


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 8   EDDEEEKAWNEPWYWWSKFH 67
           +DD+EE    + + W  K H
Sbjct: 199 DDDDEETGDRQIYPWMRKVH 218


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 111 NSKTTPTRLSQSRRSWNLDHQY 46
           N KT P   S   ++ N +H Y
Sbjct: 18  NYKTNPFLASDCDKNQNTEHNY 39


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 227 TKQDILFCYYEILMLVR*SLLLVHQAIS 144
           TKQ  +  YYEI   +R    +V++  S
Sbjct: 898 TKQPGMLAYYEICNRIRNQRWIVNRDTS 925


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,629
Number of Sequences: 336
Number of extensions: 2070
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)