Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30948X
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    36   0.010
Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical pr...    28   1.5  
Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical pr...    28   2.0  
AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical ...    27   3.4  
AF025464-2|AAN84804.1|  496|Caenorhabditis elegans Prion-like-(q...    27   4.5  
AF025464-1|AAN84805.1|  529|Caenorhabditis elegans Prion-like-(q...    27   4.5  
Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical pr...    26   6.0  
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    26   7.9  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    26   7.9  

>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 35.5 bits (78), Expect = 0.010
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
 Frame = +2

Query: 44  WYWWSKFHERLDWDKRV--GVVLELSADLPSQ----EVVKRWLGEPVKAIIVPTSIFHNN 205
           W  W+ F +       V   V L +S++LP +    ++V RW  EP+ A ++ + +F + 
Sbjct: 217 WTIWADFRKNCGNFSGVYFQVALTISSELPDELTELKLVDRWKAEPLAAFVIESGLFISG 276

Query: 206 KKGYPVLSRAHQQLV 250
           + G   +  AH  L+
Sbjct: 277 RNGEASIPSAHINLL 291


>Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical
           protein F59B2.3 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 30  LGMSPGTGGPNSMSALIGINVLVLFWSCLQIFHHR 134
           +G S    GP  M+ L G  ++   ++ +Q +HHR
Sbjct: 221 VGHSSAKLGPGEMAVLSGAKMITHLFNAMQSYHHR 255


>Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical
           protein C15H11.8 protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 332 CRYCTKNSMLDLRAPLTITCASCST 258
           C YC     L  +AP T++C  CST
Sbjct: 13  CGYCGAILELPAQAPATVSCKVCST 37


>AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical
           protein Y105C5A.1 protein.
          Length = 767

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 107 ELSADLPSQEVVKRWLGEPVKAIIVPTSIFHNNKK 211
           E S+D P++  +K+ +   VK +++P+     NKK
Sbjct: 193 EASSDAPARSPLKKKVANSVKPVVLPSRKSTRNKK 227


>AF025464-2|AAN84804.1|  496|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
           isoform a protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 134 PVMEDLQTTPKQHQHVYPN 78
           P ++  Q  P+Q QHVY N
Sbjct: 231 PQLQQFQQNPRQQQHVYSN 249


>AF025464-1|AAN84805.1|  529|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
           isoform b protein.
          Length = 529

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 134 PVMEDLQTTPKQHQHVYPN 78
           P ++  Q  P+Q QHVY N
Sbjct: 253 PQLQQFQQNPRQQQHVYSN 271


>Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical
           protein C25G4.4 protein.
          Length = 424

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -3

Query: 183 GTIIAFTGSPSHLFTTSCDG---RSADNSKTTPTRLSQSRRS 67
           G + A +  PSH  + SCDG     +D+  +T T   +S+R+
Sbjct: 4   GDVSAASVLPSHPISGSCDGFQAEGSDHHHSTMTPFQESQRN 45


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 9/24 (37%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -1

Query: 134 PVMEDL-QTTPKQHQHVYPNQGAH 66
           P+++ L +TTP++H H + + G H
Sbjct: 300 PLLQPLKETTPRRHHHGHHHHGTH 323


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 9/24 (37%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -1

Query: 134 PVMEDL-QTTPKQHQHVYPNQGAH 66
           P+++ L +TTP++H H + + G H
Sbjct: 300 PLLQPLKETTPRRHHHGHHHHGTH 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,616,655
Number of Sequences: 27780
Number of extensions: 181060
Number of successful extensions: 610
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)