Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30947X
(298 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 141 3e-33
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 134 5e-31
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 111 3e-24
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 87 7e-17
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 80 8e-15
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-14
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 75 2e-13
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 74 7e-13
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 70 1e-11
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 64 8e-10
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 63 1e-09
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 56 2e-07
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 50 8e-06
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 50 1e-05
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 50 1e-05
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 48 5e-05
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 46 1e-04
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 44 5e-04
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 5e-04
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 44 5e-04
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 43 0.002
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 43 0.002
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 42 0.003
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 42 0.004
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 42 0.004
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 41 0.005
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 40 0.011
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 40 0.015
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 38 0.034
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.034
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 38 0.059
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 38 0.059
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 38 0.059
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 37 0.10
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 37 0.10
UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1; Ba... 36 0.18
UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep:... 34 0.55
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 34 0.55
UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20; Bacteri... 34 0.72
UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep... 33 0.96
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 0.96
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 33 0.96
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 33 1.3
UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellula... 33 1.7
UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1; To... 33 1.7
UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, wh... 33 1.7
UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1; Fusobact... 32 2.2
UniRef50_UPI000023CA39 Cluster: hypothetical protein FG01741.1; ... 32 2.9
UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; cor... 32 2.9
UniRef50_A7RHP9 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 32 2.9
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 32 2.9
UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial... 32 2.9
UniRef50_A3QGD3 Cluster: Beta-ketoacyl synthase; n=1; Shewanella... 31 3.9
UniRef50_Q16H83 Cluster: Putative uncharacterized protein; n=2; ... 31 3.9
UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5... 31 3.9
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 31 3.9
UniRef50_Q54CK4 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A7LY41 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_A6LXC7 Cluster: Helix-turn-helix-domain containing prot... 31 6.7
UniRef50_A0L8Q2 Cluster: (NiFe) hydrogenase maturation protein H... 31 6.7
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 31 6.7
UniRef50_Q9Z4S3 Cluster: Argininosuccinate lyase; n=3; Thermotog... 31 6.7
UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n... 25 8.0
UniRef50_A5UZZ3 Cluster: DNA polymerase, beta domain protein reg... 30 8.9
UniRef50_Q4Q1T5 Cluster: Putative uncharacterized protein; n=3; ... 30 8.9
UniRef50_Q9NPS2 Cluster: Putative uncharacterized protein; n=2; ... 30 8.9
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 141 bits (341), Expect = 3e-33
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 190 VDIRVPVKGGGHVAQVYAIRQAFRR 264
VDIRV VKGGGHVAQ+YAIRQ+ +
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISK 90
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 134 bits (323), Expect = 5e-31
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 4 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKF 183
+E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ + P L+YKL EPILLLGKE+F
Sbjct: 6 KEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKERF 65
Query: 184 SMVDIRVPVKGGGHVAQVYAIRQAFRR 264
+ VDIR+ VKGGG+VAQ+YAIRQA +
Sbjct: 66 AGVDIRIRVKGGGNVAQIYAIRQAISK 92
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 111 bits (267), Expect = 3e-24
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 192
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LV P +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 193 DIRVPVKGGGHVAQVYAIRQAFRR 264
DIRV V GGGHV+QVYAIRQA +
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAK 87
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 87.0 bits (206), Expect = 7e-17
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +1
Query: 22 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIR 201
V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+ F +D+
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 202 VPVKGGGHVAQVYAIRQAFRR 264
+ V GGGHV+Q+YA+RQA R
Sbjct: 85 IKVAGGGHVSQIYAVRQAISR 105
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 80.2 bits (189), Expect = 8e-15
Identities = 39/80 (48%), Positives = 54/80 (67%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 192
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 193 DIRVPVKGGGHVAQVYAIRQ 252
DI V VKG GHV Q+YA+ Q
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQ 97
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/56 (55%), Positives = 48/56 (85%)
Frame = +1
Query: 19 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFS 186
+V FG+KKTATAVA+CK G G++R+NG+P+ LV P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 36.3 bits (80), Expect = 0.14
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 184 SMVDIRVPVKGGGHVAQVYAIRQAFRR 264
S VDIR+ V GGG +Q+YAIRQA +
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAK 143
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 75.4 bits (177), Expect = 2e-13
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 192
++ +Q G++KTA A A + G G +R+NG+P++++ P + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 193 DIRVPVKGGGHVAQVYAIRQAFRR 264
DI V V+GGG + Q A R A R
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIAR 84
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 73.7 bits (173), Expect = 7e-13
Identities = 32/81 (39%), Positives = 53/81 (65%)
Frame = +1
Query: 22 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIR 201
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 202 VPVKGGGHVAQVYAIRQAFRR 264
+ KGGG V+Q+YAIRQ+ +
Sbjct: 63 IFSKGGGKVSQIYAIRQSISK 83
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 69.7 bits (163), Expect = 1e-11
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 190 VDIRVPVKGGGHVAQVYAIRQAFRR 264
+ I V V GGG V+Q YA RQA +
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAK 93
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 63.7 bits (148), Expect = 8e-10
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVK 213
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 214 GGGHVAQVYAIRQAFRR 264
GGG + Q A+R A R
Sbjct: 71 GGGVMGQADAVRMAIAR 87
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 63.3 bits (147), Expect = 1e-09
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPRLLQYKLQEPILLLGKEKFS 186
P+Q+ QVFG KK A +A +G +++V L++ P QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 187 MVDIRVPVKGGGHVAQVYAI 246
V I V V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 151 EPILLLGKEKFSMVDIRVPVKGGGHVAQVYAIRQAFRR 264
EP+L++G +KF+ VDIRV V GGGH +QVYAIRQA +
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAK 99
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 50.4 bits (115), Expect = 8e-06
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVAYCKR-GHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
+++V G+KK A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 190 VDIRVPVKGGGHVAQVYAIRQAFRR 264
+ + K GG V++VYA+R AF +
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVXPRLLQYKLQEPILLLGKEKFSMVDIRVP 207
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 208 VKGGGHVAQVYAIRQAFRR 264
V GGG AQ AI+ +
Sbjct: 69 VLGGGFAAQADAIKHGISK 87
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 49.6 bits (113), Expect = 1e-05
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLL-GKEKFS 186
++ + GR+KT+ A Y + G G + VN R P +LQ +++PI+ + EKF
Sbjct: 7 VKIINTIGRRKTSIARVYLQEGSGQITVNKRDFAEYFPTDVLQTIVKQPIVAVDANEKF- 65
Query: 187 MVDIRVPVKGGGHVAQVYAIRQAFRR 264
DIR V GGG Q A+R A R
Sbjct: 66 --DIRANVTGGGVAGQAEALRHAIAR 89
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 47.6 bits (108), Expect = 5e-05
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + DI V
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 211 KGGGHVAQVYAIRQAFRR 264
KGGG Q AIR R
Sbjct: 66 KGGGINGQAGAIRHGITR 83
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 46.4 bits (105), Expect = 1e-04
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 22 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILL-LGKEKFSMVD 195
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 196 IRVPVKGGGHVAQVYAIRQAFRR 264
+ V GGG +Q AI A R
Sbjct: 65 FYIKVSGGGINSQAEAISLAISR 87
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 44.4 bits (100), Expect = 5e-04
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+KT+ A G G + VNG P L+ L L++P++ G EK DI V V
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 211 KGGGHVAQVYAIRQAFRR 264
KGGG Q A R R
Sbjct: 69 KGGGFTGQAGATRLGIAR 86
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 4 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 96
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 44.4 bits (100), Expect = 5e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+KT++A + + G G + +NG PLD R + +++P++ L + S D+ V
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 211 KGGGHVAQVYAIRQAFRR 264
+GGG Q AIR R
Sbjct: 71 QGGGDSGQAGAIRHGITR 88
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 31 FGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
F +K A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 211 KGGGHVAQVYA 243
KGGG + Q A
Sbjct: 69 KGGGFMGQAGA 79
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 42.7 bits (96), Expect = 0.002
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXP-RLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+K A G G + NGR L+ P +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 211 KGGGHVAQVYAIRQAFRR 264
GGG Q A R A R
Sbjct: 120 GGGGPTGQAGAFRLAIAR 137
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 41.9 bits (94), Expect = 0.003
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPR--LLQYKLQEPILLLGKEK 180
P + + GR+KT+ A A K G G + VN + + D + R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 181 FSMVDIRVPVKGGGHVAQVYAIRQAFRR 264
+ D+ + V GGG QV AIR A R
Sbjct: 70 Y---DLNLNVTGGGTTGQVGAIRHALAR 94
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 41.5 bits (93), Expect = 0.004
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGK-EKFSMVDIRVP 207
GR+K +TA + + G G +++N R L+ R Q +++P+ L+ EKF D+ +
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKF---DMYIT 66
Query: 208 VKGGGHVAQVYAIRQAFRR 264
V GGG Q AIR R
Sbjct: 67 VSGGGTTGQAGAIRHGITR 85
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 41.5 bits (93), Expect = 0.004
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+KTA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 211 KGGGHVAQVYAI 246
GGG Q AI
Sbjct: 139 TGGGTTGQTGAI 150
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 41.1 bits (92), Expect = 0.005
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+K + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 211 KGGGHVAQVYAIRQAFRR 264
GGG Q AIR R
Sbjct: 68 DGGGFTGQAGAIRHGIAR 85
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 39.9 bits (89), Expect = 0.011
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 4 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQ-YKLQEPILLLGKEK 180
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 181 FSMVDIRVPVKGGGHVAQVYAIRQAFRR 264
+ D+ + V GGG QV A R R
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIATRLGLAR 88
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 39.5 bits (88), Expect = 0.015
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +1
Query: 34 GRKKTATAVAYC--KRGHGMLRVNGR-PLDLVXPRLLQYKLQEPILLLG-KEKFSMVDIR 201
GR+K++TA Y + G + +N R P D +L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 202 VPVKGGGHVAQVYAIR 249
V VKGGG Q AIR
Sbjct: 67 VVVKGGGFTGQAGAIR 82
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 38.3 bits (85), Expect = 0.034
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQY--KLQEPILLLGKEKFSMVDIRVP 207
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 208 VKGGGHVAQVYAIRQAFRR 264
+GGG Q ++R R
Sbjct: 75 AEGGGLTGQADSVRLGVAR 93
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 38.3 bits (85), Expect = 0.034
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPR-LLQYKLQEPILLLG-KEKFSMVDIRV 204
GR+KT+ A G+G +NG ++ + + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 205 PVKGGGHVAQVYAIRQAFRR 264
VKGGG V QV AI+ R
Sbjct: 77 KVKGGGLVGQVNAIKLGIAR 96
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 37.5 bits (83), Expect = 0.059
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+K + A + K+G G + VNGR +D + ++ P ++ + + D+R V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 211 KGGGHVAQVYAI 246
GGGH Q A+
Sbjct: 87 AGGGHTGQAGAM 98
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 37.5 bits (83), Expect = 0.059
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVK 213
G++KT++AV + G G + VNG+ L PR L + L + ++ V+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 214 GGGHVAQVYAIRQAFRR 264
GGG Q A+ A R
Sbjct: 254 GGGVTGQAEAVTLALGR 270
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 37.5 bits (83), Expect = 0.059
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ V
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 211 KGGGHVAQVYAIRQAFRR 264
GGG AQ AIR A +
Sbjct: 333 SGGGRSAQAGAIRLAMAK 350
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 36.7 bits (81), Expect = 0.10
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXP-RLLQYKLQEPILLLGKEKF 183
EP Q GR+K A A G G ++NGR L+ P ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE-- 100
Query: 184 SMVDIRVPVKGGGHVAQVYAIRQAFRR 264
D+ + GGG Q A+R R
Sbjct: 101 GRYDVIARISGGGVSGQAGALRLGVAR 127
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 36.7 bits (81), Expect = 0.10
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+K++ A Y + G G ++VN R D + L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 211 KGGGHVAQVYAIRQAFRR 264
GGG Q AIR R
Sbjct: 74 YGGGISGQSGAIRHGISR 91
>UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S9, putative -
Babesia bovis
Length = 683
Score = 35.9 bits (79), Expect = 0.18
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 7 EPIQAVQVF--GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGK-E 177
EP++ +V+ G +KT+ AV Y + G+G + +N R R ++L+E + L
Sbjct: 550 EPVKFTKVYERGSRKTSVAVVYLEPGNGHIIINDRD-GYQYVRYCTHRLREILEPLDSIY 608
Query: 178 KFSMVDIRVPVKGGGHVAQVYAIRQAFRR 264
+ +I V GGG Q AIR A R
Sbjct: 609 AYKRFNIVARVNGGGISGQSGAIRHALCR 637
>UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep: 9S
ribosomal protein - Zea mays (Maize)
Length = 221
Score = 34.3 bits (75), Expect = 0.55
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 16 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---XPRLLQYKLQEPILLLGKEKFS 186
Q + GR+KTA A + G G + +N R P ++Y + P++ LG EK
Sbjct: 94 QRITATGRRKTAIARVVLQEGTGKVFINFRDAKEYLQGNPMWMEY-CKVPLMTLGFEK-- 150
Query: 187 MVDIRVPVKGGGHVAQVYAI 246
D+ V V GGG Q AI
Sbjct: 151 NYDVFVKVHGGGLSGQAQAI 170
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 34.3 bits (75), Expect = 0.55
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPIL-LLGKEKFSMVDIRVPV 210
G++K ++AV G G + VNG+ L+ PRL + + + L + ++ V
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 211 KGGGHVAQVYAIRQAFRR 264
+GGG Q AI A R
Sbjct: 159 RGGGVTGQAEAITLAVAR 176
>UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20;
Bacteria|Rep: 30S ribosomal protein S9 - Rhodopirellula
baltica
Length = 137
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+K++ A + G G + +NG+ + + +Y + E + G + VD+ + V
Sbjct: 17 GRRKSSVARVRVRPGSGKITINGKSIEEYFVNDQHRYAITETLEAAGLTE--SVDLLIRV 74
Query: 211 KGGGHVAQVYAIRQAFRR 264
GGG Q A+R R
Sbjct: 75 SGGGMTGQAGAVRMGLAR 92
>UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep:
Ribosomal protein S9 - Dehalococcoides sp. BAV1
Length = 132
Score = 33.5 bits (73), Expect = 0.96
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK-LQEPILLLG-KEKFSMVDIRVP 207
GR+KTA A G+G++ ++G+P++ R+ + + P+++ KF+ V +
Sbjct: 12 GRRKTAVATVKLMSGNGVIVIDGKPIEERFTRIQERNVILNPMMVTDTMGKFNAV---IK 68
Query: 208 VKGGGHVAQVYAIRQAFRR 264
V GGG Q AI R
Sbjct: 69 VLGGGVTGQSGAIAHGIAR 87
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 33.5 bits (73), Expect = 0.96
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 107 HWTWLXPDC--CSTNFRNLSFCSARKNSLWSTSECQSRV 217
H T L DC C N LS C R +LW+TS S++
Sbjct: 182 HLTSLQKDCFACMPNLMRLSMCETRVANLWTTSAVLSKI 220
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 33.5 bits (73), Expect = 0.96
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLV-----XPRLLQYKLQEPILLLGKEKFSMVDI 198
GR+KTA A Y + G G ++VNG+ + + P ++ + EP+ + D+
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAI-EPLEV--TNTLGKFDL 67
Query: 199 RVPVKGGGHVAQVYAIRQAFRR 264
+ V GGG Q A+R R
Sbjct: 68 VIRVNGGGLSGQSGAVRLGIAR 89
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 33.1 bits (72), Expect = 1.3
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGR-PLDLVXPRLLQYKL-QEPILLLGKEKFSMVDIRVP 207
GR+K+A A G G L +NGR D + + L + P+ LG E + DI V
Sbjct: 16 GRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLE--NSYDIYVN 73
Query: 208 VKGGGHVAQVYAIRQAFRR 264
GGG Q AIR R
Sbjct: 74 ATGGGLTGQADAIRLGIAR 92
>UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellular
organisms|Rep: 30S ribosomal protein S9 - Acidobacteria
bacterium (strain Ellin345)
Length = 131
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVK 213
GR+K+A A + + G G +VNG+ + Q + + L+L E + ++ V
Sbjct: 11 GRRKSAVARVFLRPGSGEFKVNGKGFEEYFVTEAQRQSAKSPLVL-TETIATFNVVANVS 69
Query: 214 GGGHVAQVYAIRQAFRR 264
GGG Q A++ R
Sbjct: 70 GGGVNGQADAVKMGLAR 86
>UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1;
Toxoplasma gondii|Rep: Ribosomal protein s9, putative -
Toxoplasma gondii
Length = 286
Score = 32.7 bits (71), Expect = 1.7
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK---LQEPILLLGKEKFSMVDIRV 204
G +K A A +RG G +RVN DL Y + +P L G + D+ +
Sbjct: 165 GTRKRAAAHVIIRRGTGQVRVNNDE-DLYVRWPFYYNRMDVLQPFFLTGTA--GIYDLFI 221
Query: 205 PVKGGGHVAQVYAIRQAFRR 264
V+GGG Q A+R A R
Sbjct: 222 HVRGGGSSGQAGAVRLAVGR 241
>UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 700
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVK 213
GR+K++ K+G G + VNG+ L + + +L L +VD+ V ++
Sbjct: 580 GRRKSSICYVQLKKGVGEVTVNGKNLINYFTHPIYRRTALRVLELA-HLSCLVDVNVVIR 638
Query: 214 GGGHVAQVYAIRQAFRR 264
GG AQ I A R
Sbjct: 639 GGSQSAQSQCICSALSR 655
>UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
30S ribosomal protein S9 - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 101
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
GR+KT+ A G + +NG+ +D R + K+ E L L E + ++V V
Sbjct: 12 GRRKTSVARVRLIPGGQGVEINGKAMDEYFGGRAILSKIVEQPLAL-TETLNKFAVKVNV 70
Query: 211 KGGGHVAQVYAIR 249
GGG+ Q AIR
Sbjct: 71 VGGGNSGQAGAIR 83
>UniRef50_UPI000023CA39 Cluster: hypothetical protein FG01741.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01741.1 - Gibberella zeae PH-1
Length = 614
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = -2
Query: 249 SDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQSGXNQVQWTPVYTQHSMTTL 70
++ V+ Y+T DW +D++ +F A DRF+++ L++ + W + +T++
Sbjct: 54 AELVSSKYLTCFSDWRADLEDPDFLSA---DRFIRY-LKEYADHFNLWPEISLSTPVTSI 109
Query: 69 AIRNCGGGFLTSEYLDGLD 13
GG + DG+D
Sbjct: 110 RRGQAGGHIVHYRGPDGID 128
>UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 492
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 37 RKKTATAVAYCKRGHGMLRV-NGRPLDLVXPRLLQYKLQEP 156
R TAT+V +RG G RV +G P V R L Y L++P
Sbjct: 229 RPATATSVGATRRGLGWFRVFSGTPTGAVAARALTYWLRDP 269
>UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; core
eudicotyledons|Rep: 30S ribosomal protein S9-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVK 213
GR+K + A + + G G +VN + D+ P +L ++ L + DI+ VK
Sbjct: 23 GRRKCSIARVWIQPGEGKFQVNEKEFDVYFP-MLDHRAALLRPLAETKTLGRWDIKCTVK 81
Query: 214 GGG 222
GGG
Sbjct: 82 GGG 84
>UniRef50_A7RHP9 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 539
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 198 QSASQGWWSCSTSLRYQTSISKA 266
+SA+ WSCSTS+R +TSI KA
Sbjct: 102 RSAALALWSCSTSMRNRTSIFKA 124
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVK 213
G++K++ A G G VNG P D+ R++ K L + + ++ V
Sbjct: 12 GKRKSSKATVKMLPGTGKFYVNGSPFDVYFQRMVHRK-HAVYPLAACNRLTNYNVWATVH 70
Query: 214 GGGHVAQVYAIRQAFRR 264
GGG Q A+ A +
Sbjct: 71 GGGPTGQSGAVHAAISK 87
>UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=5; Saccharomycetales|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Candida albicans
(Yeast)
Length = 336
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 37 RKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK-LQEPILLLGKEKFSMVDIRVPVK 213
++K++ A Y +G G + VNG+ L P + K L P ++ +E ++ V
Sbjct: 217 KRKSSIAKIYLVKGEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQE--GKYNVFAQVT 274
Query: 214 GGGHVAQVYAIRQAFRR 264
GGG+ Q AI A +
Sbjct: 275 GGGYTGQSEAIMYAIAK 291
>UniRef50_A3QGD3 Cluster: Beta-ketoacyl synthase; n=1; Shewanella
loihica PV-4|Rep: Beta-ketoacyl synthase - Shewanella
loihica (strain BAA-1088 / PV-4)
Length = 2619
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 16 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDL-VXPRLLQYKLQEPILLLGKEKFSMV 192
Q + K+A +YCKRG M VN P++ + P +L+ +L L K +
Sbjct: 62 QVDDYYDSDKSAPDKSYCKRGGFMPEVNFNPMEFGLPPNILELTDTSQLLSLIVAKEVLA 121
Query: 193 DIRVP 207
D ++P
Sbjct: 122 DAKLP 126
>UniRef50_Q16H83 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 666
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 174 LAEQKDRFLKFVLQQSGXNQVQWTPVYT-QHSMTTLAIRNCGGGF 43
L EQ ++ V Q +Q QW P + S+++ + NC GGF
Sbjct: 607 LTEQMNKSSALVPCQQSDHQQQWEPAFNLTKSVSSFVLTNCEGGF 651
>UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5;
Plasmodium|Rep: 30S ribosomal protein S9, putative -
Plasmodium vivax
Length = 304
Score = 31.5 bits (68), Expect = 3.9
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +1
Query: 7 EPIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVXPRLL-QYKLQEPILLLGKEK 180
E ++ + G K ++A Y KRG G+++VN L + P + + EP +
Sbjct: 174 EWLEESEGIGTNKRSSAYVYIKRGSGIVKVNDEEDLYIRWPYFYNRMDVLEPFYVTNTA- 232
Query: 181 FSMVDIRVPVKGGGHVAQVYAIRQAFRR 264
+ D+ + +KGGG Q A R A R
Sbjct: 233 -CVFDVFIKLKGGGISGQSKAARLAVGR 259
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 RREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK-LQEPILL 165
RR P+ + VF R ++ V K G G+ + G LD P L K L P+LL
Sbjct: 506 RRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_Q54CK4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 339
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 31 FGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRL-LQYKLQEPILLLGKEKFSMVDIRVP 207
+ ++K + AV + G+G + +NGR L P + + + +P+++ E + D+ +
Sbjct: 218 YSKRKRSRAVVSIQPGNGSILINGRTLLDYFPSISYRDNVVQPLVI--TETLTKWDVSIR 275
Query: 208 VKGGGHVAQVYAIRQA 255
GGG Q A R+A
Sbjct: 276 AFGGGLKGQSEAARRA 291
>UniRef50_A7LY41 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1320
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 140 TNFRNLSFCSARKNSLWSTSECQSRVVVM*HKFTLSDKHFEGSDRLLPDIF 292
TN SFC + N +W T+E Q + ++ F + + F + L D++
Sbjct: 514 TNISITSFCKTKDNQIWVTTENQG-LFLLDTDFQIKEHLFHSGNNYLEDLY 563
>UniRef50_A6LXC7 Cluster: Helix-turn-helix-domain containing
protein, AraC type; n=3; Clostridium|Rep:
Helix-turn-helix-domain containing protein, AraC type -
Clostridium beijerinckii NCIMB 8052
Length = 284
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 43 KTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFS 186
K + + G L++NGRP+ +V P +L +++ I +L K+ S
Sbjct: 28 KERLTITFITSGSLNLQLNGRPVKIVAPSILCLSVEDKIQVLEKQNVS 75
>UniRef50_A0L8Q2 Cluster: (NiFe) hydrogenase maturation protein
HypF; n=3; Proteobacteria|Rep: (NiFe) hydrogenase
maturation protein HypF - Magnetococcus sp. (strain
MC-1)
Length = 758
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 145 VCTAAVWXQPSPMDARLHAA-FHDHACNTQLRWRFSYVRILG 23
+C A + +P+D R HA AC QL W++ +I+G
Sbjct: 156 LCKACLAEYQNPLDRRFHAQPLACPACGPQLTWQYGSEKIIG 197
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 30.7 bits (66), Expect = 6.7
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +1
Query: 19 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK-LQEPILLLGKEKFSMVD 195
A + GR+K++ A +G G +N R + K +P L + + D
Sbjct: 11 AFRGLGRRKSSVARVILLKGSGKFTINKREAKEYLKSDIYIKDALQPFDLT--QTNNTFD 68
Query: 196 IRVPVKGGGHVAQVYAIRQAFRR 264
IRV V+GGG Q AIR R
Sbjct: 69 IRVTVRGGGLAGQAGAIRLGIAR 91
>UniRef50_Q9Z4S3 Cluster: Argininosuccinate lyase; n=3;
Thermotoga|Rep: Argininosuccinate lyase - Thermotoga
neapolitana
Length = 284
Score = 30.7 bits (66), Expect = 6.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 147 KFVLQQSGXNQVQWTPVYTQHS 82
+F ++ G ++VQW P+YTQ+S
Sbjct: 97 EFTAKELGFSRVQWNPIYTQNS 118
>UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlamydomonas reinhardtii|Rep: Chloroplast 30S ribosomal
protein S9 - Chlamydomonas reinhardtii
Length = 191
Score = 25.4 bits (53), Expect(2) = 8.0
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +1
Query: 112 DLVXPRLLQYKLQEPILLL----GKEKFSMVDIRVPVKGGGHVAQVYAIRQAFRR 264
D+V P L L+ L G E D V VKGGG + Q AIR R
Sbjct: 62 DMVSPDLSLTNLESTFTNLMQFSGGENAVKFDTIVKVKGGGLMGQTEAIRLGISR 116
Score = 23.8 bits (49), Expect(2) = 8.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGR 105
GR+K A A K G+G+ +N +
Sbjct: 9 GRRKEAVAQVQIKEGNGLFIINNK 32
>UniRef50_A5UZZ3 Cluster: DNA polymerase, beta domain protein
region; n=1; Roseiflexus sp. RS-1|Rep: DNA polymerase,
beta domain protein region - Roseiflexus sp. RS-1
Length = 127
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 138 VQTSGTYPFARQGKILYGRHQSASQ 212
V+ S Y ARQGK+LY R QS+++
Sbjct: 94 VRASLEYKIARQGKVLYDRRQSSTR 118
>UniRef50_Q4Q1T5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 903
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 116 WLXPDCCSTNFRNLSF---CSARKNSL--WSTSECQ 208
WL CCSTN + S C+ R+ S+ W+ EC+
Sbjct: 631 WLCDHCCSTNRNDRSLCLGCNERRESVCPWTCQECE 666
>UniRef50_Q9NPS2 Cluster: Putative uncharacterized protein; n=2;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 198
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = +2
Query: 137 STNF-RNLSFCSARKNSLWS 193
S+NF +N+SFC R++SLWS
Sbjct: 49 SSNFEKNMSFCQIRRDSLWS 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,598,714
Number of Sequences: 1657284
Number of extensions: 6115903
Number of successful extensions: 16230
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 15964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16217
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 10380836353
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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