Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30947X
(298 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0152 - 1168928-1169377 106 4e-24
11_01_0155 - 1287003-1287452 106 4e-24
03_06_0097 - 31632238-31632525,31633386-31633769 33 0.053
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539... 31 0.16
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 29 0.49
07_03_0227 - 15398371-15398925 29 0.49
06_03_0062 + 16116893-16117029,16117472-16117760 29 0.49
05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,9... 28 1.1
01_05_0500 + 22752190-22752329,22752957-22753032,22753292-227533... 28 1.1
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 28 1.1
01_06_0683 - 31173763-31174635,31175146-31175436 27 2.6
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 27 3.5
03_02_0334 + 7570568-7570709,7571622-7571844,7572178-7572257,757... 27 3.5
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 3.5
01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309 27 3.5
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657... 26 4.6
07_01_0008 - 56178-57095 26 4.6
06_01_1045 - 8241862-8242881 26 4.6
09_02_0168 - 5253588-5254688 26 6.0
08_01_0379 + 3371125-3371988 26 6.0
06_03_0471 + 21130839-21130869,21131013-21131127,21132228-211323... 26 6.0
01_01_0452 - 3357687-3358332,3358779-3359641 26 6.0
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 25 8.0
>12_01_0152 - 1168928-1169377
Length = 149
Score = 106 bits (254), Expect = 4e-24
Identities = 46/87 (52%), Positives = 64/87 (73%)
Frame = +1
Query: 4 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKF 183
R P VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66
Query: 184 SMVDIRVPVKGGGHVAQVYAIRQAFRR 264
+D+R+ V+GGG +Q+YAIRQA +
Sbjct: 67 KDIDMRIRVRGGGKTSQIYAIRQAIAK 93
>11_01_0155 - 1287003-1287452
Length = 149
Score = 106 bits (254), Expect = 4e-24
Identities = 46/87 (52%), Positives = 64/87 (73%)
Frame = +1
Query: 4 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKF 183
R P VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66
Query: 184 SMVDIRVPVKGGGHVAQVYAIRQAFRR 264
+D+R+ V+GGG +Q+YAIRQA +
Sbjct: 67 KDIDMRIRVRGGGKTSQIYAIRQAIAK 93
>03_06_0097 - 31632238-31632525,31633386-31633769
Length = 223
Score = 32.7 bits (71), Expect = 0.053
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 16 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---XPRLLQYKLQEPILLLGKEKFS 186
Q + GR+KTA A + G G + +N R P ++Y + P++ LG E +
Sbjct: 96 QRITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEY-CKVPLVTLGFE--N 152
Query: 187 MVDIRVPVKGGGHVAQVYAI 246
D+ V V GGG Q AI
Sbjct: 153 SYDVFVKVHGGGLSGQAQAI 172
>07_03_1553 -
27653473-27653490,27653634-27653673,27653852-27653939,
27654150-27654230,27654644-27655084,27655692-27656325
Length = 433
Score = 31.1 bits (67), Expect = 0.16
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 34 GRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVK 213
G++K + A + + G G VN + D P +L ++ + D+ VK
Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353
Query: 214 GGGHVAQVYAIRQAFRR 264
GGG QV AIR R
Sbjct: 354 GGGVSGQVGAIRLGISR 370
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 29.5 bits (63), Expect = 0.49
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 128 DCCST-NFRNLSFCSARKNSLWSTSECQSRVVVM 226
+CC+ + +LS C KN++W S S ++V+
Sbjct: 725 ECCNQLRYLSLSNCDVGKNAIWKISAPNSNIIVL 758
>07_03_0227 - 15398371-15398925
Length = 184
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 154 VPEVCTAAVWXQPSPMDARLHAAFH--DHACNTQLRWRF 44
+P +C A W P+ A H FH C+ + RW +
Sbjct: 23 LPPLCRAPWWPSPASSAAATHLRFHPRHRRCHPRRRWSY 61
>06_03_0062 + 16116893-16117029,16117472-16117760
Length = 141
Score = 29.5 bits (63), Expect = 0.49
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 109 MDARLHAAFHDHA--CNTQLRWRFSYVRILGRPGW 11
+DARL A +HA N + RWR LG+ GW
Sbjct: 26 LDARLWAVESEHARVVNPEQRWRARSTGWLGKKGW 60
>05_01_0002 -
8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,
9802-9902,10016-10651,10820-10899,11014-11673,
11787-12041,12154-12281,12515-12669,12735-12919,
13020-13049,13164-13239,13371-13504,13703-13994,
14400-14567,14647-14745,14843-15014,15103-15281
Length = 1352
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -2
Query: 279 RRRSEPSKCLSDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFL 148
+++ E S+C SD + ++H +DHR F+ +Q + L
Sbjct: 578 QKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNL 621
>01_05_0500 +
22752190-22752329,22752957-22753032,22753292-22753351,
22754718-22754882,22756299-22756358
Length = 166
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 108 WTPVYTQHSMTTLAIRNCGGGFLTSEYLD 22
W V T H +T +A R+C G F ++LD
Sbjct: 18 WNYVVTAHKLTVVA-RSCVGNFTAPDHLD 45
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -2
Query: 279 RRRSEPSKCLSDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFL 148
+++ E S+C SD + ++H +DHR F+ +Q + L
Sbjct: 776 QKQEEWSRCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNL 819
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +2
Query: 11 PSRPSKYSDVRKPPPQLRIASVVMECCV*TGVHWTWLXPDCCSTNFRNLSFCSARKNSLW 190
PS+P+K D PP Q +++SV VH P + R C K W
Sbjct: 224 PSKPAKKKDAPAPPAQAQLSSV--------PVHSGGSAPAAAAGEGRRCLHCETDKTPQW 275
Query: 191 ST 196
T
Sbjct: 276 RT 277
>04_04_1154 -
31297628-31298020,31298150-31298300,31298389-31298620,
31298700-31298910,31299137-31299255,31299341-31299415,
31299991-31300189,31300258-31300664,31300775-31300839,
31300967-31301011,31301449-31301520,31301597-31301671,
31301912-31301983,31302178-31302249,31302525-31302596,
31302880-31302951,31303056-31303127,31304064-31304135,
31304375-31304561,31304686-31304815
Length = 930
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 97 NGRPLDLVXPRLLQYKLQEPILLL 168
NG PLD V P+L ++ +E I ++
Sbjct: 807 NGHPLDFVDPKLSEFNSEEVIRVI 830
>03_02_0334 +
7570568-7570709,7571622-7571844,7572178-7572257,
7572869-7572929,7573670-7573796
Length = 210
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 118 PSPMDARLHAAFHDHACNTQLRWRFSYVRILGR 20
PSP A+ AA A N LRWR +L R
Sbjct: 7 PSPPPAQASAAEASGASNASLRWRILRRALLAR 39
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 157 ILLLGKEKFSMVDIRVPVKGGGHVAQVYAIRQAFR 261
++ LG + V I + GGGH A AI+ AFR
Sbjct: 91 LVQLGANRAKNVLILMSDTGGGHRASAEAIKDAFR 125
>01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309
Length = 330
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 192 DH-REFFLAEQKDRFLKFVLQQSGXNQVQWTPVYTQHSMTTLAIRNCGGGFLTSEYLDGL 16
DH E + E +FL+ Q + + +W +YT +S++ LA+ N L LD
Sbjct: 212 DHLSEELINEMVMKFLEQTKQDNWSSGNEWPQMYTDYSISKLAV-NAYTRLLARRLLDRP 270
Query: 15 DG 10
+G
Sbjct: 271 EG 272
>10_07_0132 +
13263577-13263732,13265391-13265456,13265607-13265705,
13267020-13267084,13267210-13267294,13267389-13267422,
13267539-13267642,13268085-13268408,13269090-13269605
Length = 482
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 44 KPPPQLRIASVVMECCV*TGVHWTW 118
K PPQ+ ++ + + C V GV + W
Sbjct: 16 KAPPQISLSGLFLACMVAGGVQYGW 40
>07_01_0008 - 56178-57095
Length = 305
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 139 TAAVWXQPSPMDARLHAAFHDHACNTQLRWRFS 41
TAA PS ARLH+ H +A + L+ R S
Sbjct: 119 TAASHLAPSSAPARLHSWIHYNATSATLQLRLS 151
>06_01_1045 - 8241862-8242881
Length = 339
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 145 LQEPILLLGKEKFSMVDIRVP 207
L+EP+L E+FSM IR P
Sbjct: 13 LEEPLLAESSERFSMFPIRYP 33
>09_02_0168 - 5253588-5254688
Length = 366
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 15 PGRPSIRT*ENRHRSCVLQAW 77
P P+++T NR R CV Q W
Sbjct: 105 PMDPALKTDANRVRGCVSQVW 125
>08_01_0379 + 3371125-3371988
Length = 287
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXP 126
P A +FGR +TA V+Y GHG LD V P
Sbjct: 185 PAAAWPLFGRVQTAAPVSY-GGGHGSAAAATMFLDTVAP 222
>06_03_0471 +
21130839-21130869,21131013-21131127,21132228-21132309,
21132444-21132648,21133237-21133296,21133420-21133472,
21133589-21133711,21133844-21133913,21134012-21134090,
21134172-21134253,21134272-21134310
Length = 312
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 153 TYPFARQGKILYGRHQSASQGWWSC 227
TY F R+ + YGR G W C
Sbjct: 73 TYDFVRRMREEYGRVDKTEMGIWEC 97
>01_01_0452 - 3357687-3358332,3358779-3359641
Length = 502
Score = 25.8 bits (54), Expect = 6.0
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 159 PFARQGKILYGRHQSASQGWWS-CSTSL 239
PF ++G +++ R + WW C +L
Sbjct: 430 PFTKKGGVIFARDEYGDSVWWKICGAAL 457
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 8 SPSRPSKYSDVRKPPPQLRIAS 73
S S P K SD R PPP+ R S
Sbjct: 37 SRSPPPKKSDSRSPPPRRRSTS 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,391,428
Number of Sequences: 37544
Number of extensions: 183278
Number of successful extensions: 511
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 327448548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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