Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30947X
(298 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 141 4e-34
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 141 4e-34
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 141 4e-34
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 141 4e-34
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 133 8e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 80 1e-15
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 38 0.008
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 38 0.008
AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein pr... 30 1.2
AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophil... 29 2.7
AF202637-1|AAG22491.1| 155|Homo sapiens PP3111 protein. 28 4.7
BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology dom... 28 6.2
AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein. 28 6.2
AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens ... 28 6.2
AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein. 28 6.2
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 141 bits (341), Expect = 4e-34
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 190 VDIRVPVKGGGHVAQVYAIRQAFRR 264
VDIRV VKGGGHVAQ+YAIRQ+ +
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISK 90
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 141 bits (341), Expect = 4e-34
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 190 VDIRVPVKGGGHVAQVYAIRQAFRR 264
VDIRV VKGGGHVAQ+YAIRQ+ +
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISK 90
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 141 bits (341), Expect = 4e-34
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 190 VDIRVPVKGGGHVAQVYAIRQAFRR 264
VDIRV VKGGGHVAQ+YAIRQ+ +
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISK 90
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 141 bits (341), Expect = 4e-34
Identities = 62/85 (72%), Positives = 78/85 (91%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 190 VDIRVPVKGGGHVAQVYAIRQAFRR 264
VDIRV VKGGGHVAQ+YAIRQ+ +
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISK 90
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 133 bits (322), Expect = 8e-32
Identities = 59/81 (72%), Positives = 73/81 (90%)
Frame = +1
Query: 10 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 189
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 190 VDIRVPVKGGGHVAQVYAIRQ 252
VDIRV VKGGGHVAQ+Y Q
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQ 86
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/80 (48%), Positives = 54/80 (67%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 192
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 193 DIRVPVKGGGHVAQVYAIRQ 252
DI V VKG GHV Q+YA+ Q
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQ 97
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ V
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 211 KGGGHVAQVYAIRQAFRR 264
GGG AQ AIR A +
Sbjct: 333 SGGGRSAQAGAIRLAMAK 350
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 34 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPV 210
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ V
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 211 KGGGHVAQVYAIRQAFRR 264
GGG AQ AIR A +
Sbjct: 239 SGGGRSAQAGAIRLAMAK 256
>AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein
protein.
Length = 198
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/20 (60%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = +2
Query: 137 STNF-RNLSFCSARKNSLWS 193
S+NF +N+SFC R++SLWS
Sbjct: 49 SSNFEKNMSFCQIRRDSLWS 68
>AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophila)
homolog-associated protein 3 protein.
Length = 979
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 189 GRHQSASQGWWSCSTSL 239
GRHQ+ S GWWS +L
Sbjct: 251 GRHQAKSTGWWSSDDNL 267
>AF202637-1|AAG22491.1| 155|Homo sapiens PP3111 protein.
Length = 155
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 92 RSIP*PRLQYATAVAVFLRPNTWTAWMGSR 3
RS P RLQ A FL+PN + W G R
Sbjct: 25 RSEPPKRLQTAQVTDCFLKPNWRSLWPGKR 54
>BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology domain
containing, family M (with RUN domain) member 1 protein.
Length = 1056
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -2
Query: 294 VNISGRRRSEPSKCLSDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQ 130
+++ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 915 MHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 967
>AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein.
Length = 628
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -2
Query: 294 VNISGRRRSEPSKCLSDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQ 130
+++ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 487 MHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 539
>AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens B2
gene partial cDNA, clone B2E. ).
Length = 926
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -2
Query: 294 VNISGRRRSEPSKCLSDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQ 130
+++ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 785 MHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 837
>AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein.
Length = 1058
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -2
Query: 294 VNISGRRRSEPSKCLSDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQ 130
+++ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 917 MHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,543,157
Number of Sequences: 237096
Number of extensions: 994139
Number of successful extensions: 2727
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2727
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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