Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30947X
(298 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 128 9e-31
AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4 ... 27 1.8
AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin pro... 27 1.8
Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical pr... 27 3.2
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 27 3.2
U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical pr... 26 5.6
U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily ass... 26 5.6
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 26 5.6
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 26 5.6
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 5.6
Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 25 9.7
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 25 9.7
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 25 9.7
AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or ad... 25 9.7
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 25 9.7
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 128 bits (308), Expect = 9e-31
Identities = 54/84 (64%), Positives = 73/84 (86%)
Frame = +1
Query: 13 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 192
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ + P++L+ KLQEP+LL+GKE+F V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 193 DIRVPVKGGGHVAQVYAIRQAFRR 264
DIR+ V GGGHVAQ+YA+RQA +
Sbjct: 65 DIRIRVSGGGHVAQIYAVRQALAK 88
>AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4
protein.
Length = 348
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -2
Query: 228 YMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQSGXNQVQWTPVYTQHSMTTLAIRNCGG 49
YMTT+ + +HR + L E ++ L + S + + P Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 48 G 46
G
Sbjct: 208 G 208
>AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin
protein 4 protein.
Length = 348
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -2
Query: 228 YMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQSGXNQVQWTPVYTQHSMTTLAIRNCGG 49
YMTT+ + +HR + L E ++ L + S + + P Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 48 G 46
G
Sbjct: 208 G 208
>Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical
protein K04D7.3 protein.
Length = 483
Score = 26.6 bits (56), Expect = 3.2
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = -2
Query: 261 SKCLSDSVNLCYMTTTLDWHSDVDHR--EFFLAEQKDRFLKFVLQQS----GXNQVQWTP 100
SK L ++ + TT++ +H D + + + + L Q S G N
Sbjct: 39 SKALKQEMDKVHQTTSVRFHVDYEKSFGNYVVDADGNALLDVYTQISSLPLGYNHPDLVK 98
Query: 99 VYTQ-HSMTTLAIRNCGGGFLTSEYLDGLD-GLTS 1
V +Q H +T+L R G F +++ DG+ LTS
Sbjct: 99 VASQPHLITSLVSRPALGSFPRTDFADGISHALTS 133
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 159 DRFLKFVLQQSGXNQVQWTPVYTQHSMTTLAIRNCGGGFLT 37
+RF+ F+ +++ N Q TPV + S ++ G FL+
Sbjct: 240 ERFVNFLQKENAENSNQTTPVRSMGSTPLSGAKSKNGSFLS 280
>U97008-8|AAB52306.2| 307|Caenorhabditis elegans Hypothetical
protein C03G6.6 protein.
Length = 307
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 267 EPSKCLSDSVNLCYMTTTLDWHSDVDHREFFLAEQKDRFLKFVLQQ 130
E K + ++LC + + SDV HR+ E+ +FLK ++Q+
Sbjct: 236 ENGKFVQSGIDLCQVNIEIHITSDVAHRK----EEFMKFLKRIIQE 277
>U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform c protein.
Length = 860
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 97 NGRPLDLVXPRLLQYKLQEPILLLGKEKFS 186
NGRPLDL R + + + L EKFS
Sbjct: 584 NGRPLDLYSERYMSISPEAVVRLELNEKFS 613
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
gene nameprotein 152, isoform a protein.
Length = 2560
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 97 NGRPLDLVXPRLLQYKLQEPILLLGKEKFS 186
NGRPLDL R + + + L EKFS
Sbjct: 2255 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2284
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 97 NGRPLDLVXPRLLQYKLQEPILLLGKEKFS 186
NGRPLDL R + + + L EKFS
Sbjct: 2197 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2226
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 97 NGRPLDLVXPRLLQYKLQEPILLLGKEKFS 186
NGRPLDL R + + + L EKFS
Sbjct: 2379 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2408
>Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.1 protein.
Length = 681
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -1
Query: 127 WXQPSPM--DARLHAAFHDHACNTQL 56
W QP P+ +AR AA+H + C T L
Sbjct: 108 WLQPIPVPANARGQAAYHPYDCMTLL 133
>Z81564-3|CAB04577.1| 536|Caenorhabditis elegans Hypothetical
protein K05C4.3 protein.
Length = 536
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 276 RRSEPS-KCLSDSVNLCYMTTTLDW 205
+RSEP+ KCLSD + L DW
Sbjct: 220 KRSEPAKKCLSDMLFLLRQRNEYDW 244
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical protein
F16D3.4 protein.
Length = 1232
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 85 MLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVDIRVPVKGGG 222
++ + P+D + R + ++L+ P+L LG E + + + + V GG
Sbjct: 1004 LMNIYSEPMDFISDRTV-FQLK-PLLDLGSEYYEQLILGIVVSAGG 1047
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 8 SPSRPSKYSDVRKPPPQLRIASVVMECCV*TG-----VHWTWLXPDCCSTNFRNLSFCSA 172
SPS+P K S K PP + S+ V +G VHW D N++ +S+ S+
Sbjct: 250 SPSKPFKISKEAKAPPPPKDLSLGASKVVASGLWNQMVHWNPPPSDLPIKNYQ-ISWASS 308
Query: 173 RKN 181
K+
Sbjct: 309 TKS 311
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 8 SPSRPSKYSDVRKPPPQLRIASVVMECCV*TG-----VHWTWLXPDCCSTNFRNLSFCSA 172
SPS+P K S K PP + S+ V +G VHW D N++ +S+ S+
Sbjct: 250 SPSKPFKISKEAKAPPPPKDLSLGASKVVASGLWNQMVHWNPPPSDLPIKNYQ-ISWASS 308
Query: 173 RKN 181
K+
Sbjct: 309 TKS 311
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 11 PSRPSKYSDVRKPPP 55
PS P Y D KPPP
Sbjct: 205 PSAPPPYDDYSKPPP 219
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 137 STNFRNLSFCSARKNSLWSTSE 202
S RNL C R+ +WSTS+
Sbjct: 663 SEQLRNLRKCKNRQCEIWSTSQ 684
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 8 SPSRPSKYSDVRKPPPQLRIASVVMECCV*TG-----VHWTWLXPDCCSTNFRNLSFCSA 172
SPS+P K S K PP + S+ V +G VHW D N++ +S+ S+
Sbjct: 250 SPSKPFKISKEAKAPPPPKDLSLGASKVVASGLWNQMVHWNPPPSDLPIKNYQ-ISWASS 308
Query: 173 RKN 181
K+
Sbjct: 309 TKS 311
>AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform b protein.
Length = 979
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 145 VCTAAVWXQPSPMDARLHAAFHDHACNTQLRWRFSYVRILGRP 17
VCT ++ QPSP+D+ AA C + YV + RP
Sbjct: 724 VCTPSIPHQPSPIDS--EAATSSEYCRLAAN-KTIYVDFVARP 763
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 145 VCTAAVWXQPSPMDARLHAAFHDHACNTQLRWRFSYVRILGRP 17
VCT ++ QPSP+D+ AA C + YV + RP
Sbjct: 996 VCTPSIPHQPSPIDS--EAATSSEYCRLAAN-KTIYVDFVARP 1035
>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
protein Y45G5AM.2 protein.
Length = 1061
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 173 RKNSLWSTSECQSRVVVM*HKFTLSD 250
RK +STS+C SR + H F D
Sbjct: 68 RKEMFYSTSKCDSRFINNLHTFNTFD 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,539,245
Number of Sequences: 27780
Number of extensions: 142461
Number of successful extensions: 337
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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