Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30945
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.8  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 477 LGWNILVCLGSNCHIG 430
           L WN  VC  SNC  G
Sbjct: 754 LDWNYPVCWQSNCKKG 769


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 433 NMTIAPQTYQNVPAQSPQGYQINSSS 510
           N  + P+T  N  + SPQ    N+S+
Sbjct: 146 NKVVTPKTSPNEASMSPQSTSSNNSA 171


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 433 NMTIAPQTYQNVPAQSPQGYQINSSS 510
           N  + P+T  N  + SPQ    N+S+
Sbjct: 166 NKVVTPKTSPNEASMSPQSTSSNNSA 191


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 435 YDNCSPNIPECSSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPTQSP-TNY 584
           +D   P +     PIT  + +K+  S +N   ++   P   +  Q P TN+
Sbjct: 145 HDILQPGVKGLHGPITRVIDSKVVDSRKNTTVSIDVFPAVARWMQDPKTNH 195


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 531 NVAQSPRNYQPTQSP 575
           + A S  NY P+QSP
Sbjct: 208 STASSASNYSPSQSP 222


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 439 TIAPQTYQNVPAQSPQGYQINSSSQI 516
           TIA +T+QN+P         NS S +
Sbjct: 154 TIAYETFQNLPELEDLDLAYNSISSL 179


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 511 DLKSLFDSPVVIGLEHSG 458
           DLKS+  S ++ GL+ SG
Sbjct: 228 DLKSIRKSELLAGLQSSG 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,551
Number of Sequences: 336
Number of extensions: 2502
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)