Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30945
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC016665-1|AAH16665.1| 526|Homo sapiens thymocyte selection-ass... 71 4e-12
AB018351-1|BAA34528.2| 530|Homo sapiens KIAA0808 protein protein. 71 4e-12
U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein. 70 6e-12
BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group... 66 1e-10
BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for MG... 66 1e-10
AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open read... 66 1e-10
AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open read... 66 1e-10
AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein. 66 1e-10
AL121587-1|CAI21559.1| 488|Homo sapiens chromosome 20 open read... 50 9e-06
AL034419-1|CAI42198.1| 488|Homo sapiens chromosome 20 open read... 50 9e-06
AK055135-1|BAB70860.1| 488|Homo sapiens protein ( Homo sapiens ... 50 9e-06
BC129934-1|AAI29935.1| 1652|Homo sapiens PB1 protein protein. 36 0.088
AY281068-1|AAP34197.1| 1689|Homo sapiens polybromo-1D protein. 36 0.088
D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein. 36 0.15
BC129935-1|AAI29936.1| 1597|Homo sapiens PB1 protein protein. 35 0.27
BC115011-1|AAI15012.1| 1540|Homo sapiens PB1 protein protein. 35 0.27
BC115010-1|AAI15011.1| 1615|Homo sapiens PB1 protein protein. 35 0.27
BC115009-1|AAI15010.1| 1454|Homo sapiens PB1 protein protein. 35 0.27
BC089409-1|AAH89409.1| 425|Homo sapiens PB1 protein protein. 35 0.27
BC015323-1|AAH15323.1| 306|Homo sapiens PB1 protein protein. 35 0.27
AK001507-1|BAA91728.1| 306|Homo sapiens protein ( Homo sapiens ... 35 0.27
AF225872-1|AAG48941.1| 1582|Homo sapiens polybromo-1 protein. 35 0.27
AF225870-1|AAG48939.1| 1602|Homo sapiens polybromo-1 protein. 35 0.27
AF197569-1|AAG34760.1| 1582|Homo sapiens BAF180 protein. 35 0.27
AF177387-1|AAG48933.1| 1634|Homo sapiens polybromo-1 protein. 35 0.27
Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein. 34 0.47
U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein. 34 0.47
BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homo... 34 0.47
AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Ta... 34 0.47
AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homo... 34 0.47
AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein. 34 0.47
Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group (nonh... 33 0.62
X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for ... 33 0.62
U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin pro... 33 0.62
L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 33 0.62
EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box... 33 0.62
EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box... 33 0.62
CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein. 33 0.62
CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein. 33 0.62
BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box... 33 0.62
BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box... 33 0.62
BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein. 33 0.62
BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein. 33 0.62
BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box... 33 0.62
BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box... 33 0.62
BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box... 33 0.62
BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box... 33 0.62
AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group pro... 33 0.62
AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box... 33 0.62
AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box... 33 0.62
AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein pr... 33 0.62
AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group pro... 33 0.62
AJ010069-1|CAA08991.1| 196|Homo sapiens HMGBCG protein protein. 33 0.62
AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box... 33 0.62
BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box... 33 0.82
BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein. 32 1.4
BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein. 32 1.4
BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein. 32 1.4
Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group prote... 32 1.9
BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix... 32 1.9
BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein. 32 1.9
BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix... 32 1.9
BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix... 32 1.9
BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix... 32 1.9
AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein. 32 1.9
AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box... 31 2.5
L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 30 5.8
AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. 30 5.8
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 30 5.8
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 30 5.8
Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein. 30 7.6
X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein. 30 7.6
M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2 pro... 30 7.6
BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box... 30 7.6
BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box... 30 7.6
BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein. 30 7.6
BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box... 30 7.6
>BC016665-1|AAH16665.1| 526|Homo sapiens thymocyte
selection-associated high mobility group box protein.
Length = 526
Score = 70.5 bits (165), Expect = 4e-12
Identities = 35/56 (62%), Positives = 37/56 (66%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEIXXXXXXXXXXXXXXSLVSK 169
KGQNPNA+FGEVSKIVASMWDGL E K VYK+KTE SLVSK
Sbjct: 280 KGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSK 335
>AB018351-1|BAA34528.2| 530|Homo sapiens KIAA0808 protein protein.
Length = 530
Score = 70.5 bits (165), Expect = 4e-12
Identities = 35/56 (62%), Positives = 37/56 (66%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEIXXXXXXXXXXXXXXSLVSK 169
KGQNPNA+FGEVSKIVASMWDGL E K VYK+KTE SLVSK
Sbjct: 284 KGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSK 339
>U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein.
Length = 331
Score = 70.1 bits (164), Expect = 6e-12
Identities = 35/64 (54%), Positives = 39/64 (60%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEIXXXXXXXXXXXXXXSLVSKGGEQ 181
KGQNPNA+FGEVSKIVASMWD L E K VYK+KTE SLVSK +
Sbjct: 29 KGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAE 88
Query: 182 ENQA 193
+A
Sbjct: 89 SAEA 92
>BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group
box family member 4 protein.
Length = 621
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
KGQNPNA+FGEVSKIVASMWD L E K VYK+KTE
Sbjct: 242 KGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTE 277
>BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for
MGC:15880) protein.
Length = 464
Score = 65.7 bits (153), Expect = 1e-10
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEIXXXXXXXXXXXXXXSLVSKGGEQ 181
KGQNP+A+FG+VSKIVASMWD L E K YK+KTE SLVSK
Sbjct: 223 KGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPD 282
Query: 182 ENQAMYNHTN 211
+ + N
Sbjct: 283 QGETKSTQAN 292
>AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 65.7 bits (153), Expect = 1e-10
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEIXXXXXXXXXXXXXXSLVSKGGEQ 181
KGQNP+A+FG+VSKIVASMWD L E K YK+KTE SLVSK
Sbjct: 223 KGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPD 282
Query: 182 ENQAMYNHTN 211
+ + N
Sbjct: 283 QGETKSTQAN 292
>AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 65.7 bits (153), Expect = 1e-10
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEIXXXXXXXXXXXXXXSLVSKGGEQ 181
KGQNP+A+FG+VSKIVASMWD L E K YK+KTE SLVSK
Sbjct: 223 KGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPD 282
Query: 182 ENQAMYNHTN 211
+ + N
Sbjct: 283 QGETKSTQAN 292
>AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein.
Length = 629
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
KGQNPNA+FGEVSKIVASMWD L E K VYK+KTE
Sbjct: 250 KGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTE 285
>AL121587-1|CAI21559.1| 488|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 488
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHK 85
KGQNP+A+FG+VSKIVASMWD L E K
Sbjct: 274 KGQNPSATFGDVSKIVASMWDSLGEEQK 301
>AL034419-1|CAI42198.1| 488|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 488
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHK 85
KGQNP+A+FG+VSKIVASMWD L E K
Sbjct: 274 KGQNPSATFGDVSKIVASMWDSLGEEQK 301
>AK055135-1|BAB70860.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ30573 fis, clone BRAWH2006450, weakly similar to
Homo sapiens CAGF9 mRNA. ).
Length = 488
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHK 85
KGQNP+A+FG+VSKIVASMWD L E K
Sbjct: 274 KGQNPSATFGDVSKIVASMWDSLGEEQK 301
>BC129934-1|AAI29935.1| 1652|Homo sapiens PB1 protein protein.
Length = 1652
Score = 36.3 bits (80), Expect = 0.088
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K Q+P+ SFGE+S++V + W L++ K+ Y+++
Sbjct: 1413 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYEER 1446
>AY281068-1|AAP34197.1| 1689|Homo sapiens polybromo-1D protein.
Length = 1689
Score = 36.3 bits (80), Expect = 0.088
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K Q+P+ SFGE+S++V + W L++ K+ Y+++
Sbjct: 1398 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYEER 1431
>D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein.
Length = 215
Score = 35.5 bits (78), Expect = 0.15
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
KG++P S G+V+K + MW+ ++ K Y++K E
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAE 149
>BC129935-1|AAI29936.1| 1597|Homo sapiens PB1 protein protein.
Length = 1597
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1413 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1444
>BC115011-1|AAI15012.1| 1540|Homo sapiens PB1 protein protein.
Length = 1540
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1304 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1335
>BC115010-1|AAI15011.1| 1615|Homo sapiens PB1 protein protein.
Length = 1615
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1379 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1410
>BC115009-1|AAI15010.1| 1454|Homo sapiens PB1 protein protein.
Length = 1454
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1397 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1428
>BC089409-1|AAH89409.1| 425|Homo sapiens PB1 protein protein.
Length = 425
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 189 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 220
>BC015323-1|AAH15323.1| 306|Homo sapiens PB1 protein protein.
Length = 306
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 70 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 101
>AK001507-1|BAA91728.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ10645 fis, clone NT2RP2005767, moderately
similar to G.gallus PB1 gene. ).
Length = 306
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 70 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 101
>AF225872-1|AAG48941.1| 1582|Homo sapiens polybromo-1 protein.
Length = 1582
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1398 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1429
>AF225870-1|AAG48939.1| 1602|Homo sapiens polybromo-1 protein.
Length = 1602
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1366 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1397
>AF197569-1|AAG34760.1| 1582|Homo sapiens BAF180 protein.
Length = 1582
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1346 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1377
>AF177387-1|AAG48933.1| 1634|Homo sapiens polybromo-1 protein.
Length = 1634
Score = 34.7 bits (76), Expect = 0.27
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYK 97
K Q+P+ SFGE+S++V + W L++ K+ Y+
Sbjct: 1398 KAQHPDYSFGELSRLVGTEWRNLETAKKAEYE 1429
>Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein.
Length = 1087
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 543 SPRNYQPTQSPTNYPASSSMSPPGY 617
SP +Y PT SP Y AS S SP GY
Sbjct: 926 SPASYHPTPSPMAYQASPSPSPVGY 950
>U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein.
Length = 1087
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 543 SPRNYQPTQSPTNYPASSSMSPPGY 617
SP +Y PT SP Y AS S SP GY
Sbjct: 926 SPASYHPTPSPMAYQASPSPSPVGY 950
>BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homolog
(S. cerevisiae) protein.
Length = 1087
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 543 SPRNYQPTQSPTNYPASSSMSPPGY 617
SP +Y PT SP Y AS S SP GY
Sbjct: 926 SPASYHPTPSPMAYQASPSPSPVGY 950
>AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Tat-CT1
protein.
Length = 1087
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 543 SPRNYQPTQSPTNYPASSSMSPPGY 617
SP +Y PT SP Y AS S SP GY
Sbjct: 926 SPASYHPTPSPMAYQASPSPSPVGY 950
>AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homolog
variant protein.
Length = 1116
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 543 SPRNYQPTQSPTNYPASSSMSPPGY 617
SP +Y PT SP Y AS S SP GY
Sbjct: 955 SPASYHPTPSPMAYQASPSPSPVGY 979
>AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein.
Length = 1087
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 543 SPRNYQPTQSPTNYPASSSMSPPGY 617
SP +Y PT SP Y AS S SP GY
Sbjct: 926 SPASYHPTPSPMAYQASPSPSPVGY 950
>Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group
(nonhistone chromosomal) protein 1-like 10 protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for
high mobility group-1 protein (HMG-1). ).
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin
protein HMG1 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein.
Length = 216
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box 1
protein protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein.
Length = 601
Score = 33.5 bits (73), Expect = 0.62
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
+P FGE+SK +A +W L + K ++KQK +
Sbjct: 429 HPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 461
>BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.62
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
+P FGE+SK +A +W L + K ++KQK +
Sbjct: 320 HPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 352
>BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.62
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
+P FGE+SK +A +W L + K ++KQK +
Sbjct: 320 HPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 352
>BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group
protein 1 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box 1
protein.
Length = 158
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 147
>AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.62
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
+P FGE+SK +A +W L + K ++KQK +
Sbjct: 320 HPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 352
>AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group
protein 2-like 1 protein.
Length = 601
Score = 33.5 bits (73), Expect = 0.62
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
+P FGE+SK +A +W L + K ++KQK +
Sbjct: 429 HPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 461
>AJ010069-1|CAA08991.1| 196|Homo sapiens HMGBCG protein protein.
Length = 196
Score = 33.5 bits (73), Expect = 0.62
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
+P FGE+SK +A +W L + K ++KQK +
Sbjct: 24 HPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 56
>AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box 1
variant protein.
Length = 176
Score = 33.5 bits (73), Expect = 0.62
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 116 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 149
>BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 33.1 bits (72), Expect = 0.82
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S G+V+K + MW+ ++ K Y++K
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQHYEKK 147
>BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 32.3 bits (70), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K NP S G+V+K + MW+ L+ K Y K
Sbjct: 48 KSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 81
>BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 32.3 bits (70), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K NP S G+V+K + MW+ L+ K Y K
Sbjct: 48 KSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 81
>BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 32.3 bits (70), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K NP S G+V+K + MW+ L+ K Y K
Sbjct: 48 KSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 81
>Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group protein
2a protein.
Length = 200
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K NP S G+V+K + MW+ L+ K Y K
Sbjct: 112 KSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK 145
>BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
K NP+ E+ KI+ MW L E K Y + E
Sbjct: 85 KASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE 120
>BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein.
Length = 200
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K NP S G+V+K + MW+ L+ K Y K
Sbjct: 112 KSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK 145
>BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
K NP+ E+ KI+ MW L E K Y + E
Sbjct: 85 KASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE 120
>BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
K NP+ E+ KI+ MW L E K Y + E
Sbjct: 85 KASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE 120
>BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
K NP+ E+ KI+ MW L E K Y + E
Sbjct: 85 KASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE 120
>AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein.
Length = 411
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
K NP+ E+ KI+ MW L E K Y + E
Sbjct: 85 KASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE 120
>AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box 1
protein.
Length = 162
Score = 31.5 bits (68), Expect = 2.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQ 100
KG++P S G+V+K + MW+ ++ K Y++
Sbjct: 114 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 146
>L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein.
Length = 403
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S +V K +A MW+ + K Y++K
Sbjct: 312 KGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 345
>AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein.
Length = 181
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S +V K +A MW+ + K Y++K
Sbjct: 90 KGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 123
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S +V K +A MW+ + K Y++K
Sbjct: 788 KGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 821
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
KG++P S +V K +A MW+ + K Y++K
Sbjct: 752 KGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKK 785
>Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein.
Length = 186
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K ++P S G+ +K + MW ++ K Y+QK
Sbjct: 91 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 124
>X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein.
Length = 209
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K ++P S G+ +K + MW ++ K Y+QK
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
>M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2
protein protein.
Length = 209
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K ++P S G+ +K + MW ++ K Y+QK
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
>BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box 2
protein.
Length = 208
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K ++P S G+ +K + MW ++ K Y+QK
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
>BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K ++P S G+ +K + MW ++ K Y+QK
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
>BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein.
Length = 209
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K ++P S G+ +K + MW ++ K Y+QK
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
>BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 29.9 bits (64), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
K ++P S G+ +K + MW ++ K Y+QK
Sbjct: 114 KSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,343,443
Number of Sequences: 237096
Number of extensions: 1492003
Number of successful extensions: 4558
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 4314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4558
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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