Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30945
(623 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061531-1|AAL29079.1| 250|Drosophila melanogaster LP01188p pro... 36 0.059
AE014296-293|AAF47518.1| 250|Drosophila melanogaster CG12104-PA... 36 0.059
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro... 31 0.96
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P... 31 0.96
X66270-1|CAA46985.1| 497|Drosophila melanogaster ems W13 protein. 29 6.8
AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro... 29 6.8
AE014134-3185|AAF53863.1| 470|Drosophila melanogaster CG13966-P... 29 6.8
M12927-1|AAA70218.1| 451|Drosophila melanogaster unknown protei... 28 8.9
EF591043-1|ABQ84944.1| 451|Drosophila melanogaster gag protein. 28 8.9
EF591042-1|ABQ84942.1| 451|Drosophila melanogaster gag protein ... 28 8.9
DQ887187-1|ABI48305.1| 451|Drosophila melanogaster gag protein ... 28 8.9
DQ887186-1|ABI48302.1| 451|Drosophila melanogaster gag protein ... 28 8.9
BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p pro... 28 8.9
AF033821-3|AAC82603.1| 451|Drosophila melanogaster Prgag protein. 28 8.9
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 28 8.9
AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA... 28 8.9
>AY061531-1|AAL29079.1| 250|Drosophila melanogaster LP01188p
protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.059
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
K QNP S ++ IV +MW+ LD K+VY + E
Sbjct: 95 KQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHE 130
>AE014296-293|AAF47518.1| 250|Drosophila melanogaster CG12104-PA
protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.059
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 2 KGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
K QNP S ++ IV +MW+ LD K+VY + E
Sbjct: 95 KQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHE 130
>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
Length = 1654
Score = 31.5 bits (68), Expect = 0.96
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
NP+A+FG++S++V + W L S K ++ +
Sbjct: 1338 NPDATFGDISRMVGTEWKNLPSSVKQSWEDR 1368
>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
protein.
Length = 1654
Score = 31.5 bits (68), Expect = 0.96
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 11 NPNASFGEVSKIVASMWDGLDSEHKSVYKQK 103
NP+A+FG++S++V + W L S K ++ +
Sbjct: 1338 NPDATFGDISRMVGTEWKNLPSSVKQSWEDR 1368
>X66270-1|CAA46985.1| 497|Drosophila melanogaster ems W13 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQ-MLLNHLETTNPHSHQQITLQVLQCHH 609
Q Q Q+P + S +Q +++Q +L+ H P SHQ I + + HH
Sbjct: 99 QQQQQQHLQAPHPHPHLSPAQQHVLHQHLLMQHQHPGTPKSHQDIQELLQRLHH 152
>AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p protein.
Length = 1371
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 426 PSQYDNCSPNIPECSSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPTQSPTNYPASSSM 602
P CSP PE S + S+ + + + +P+ A SP++ + QSP++ S+
Sbjct: 977 PPDTTTCSPRSPERPSSYRSSGSD-MVQCVSSSEPDAAVSPQSTESRQSPSSTDCERSI 1034
>AE014134-3185|AAF53863.1| 470|Drosophila melanogaster CG13966-PA
protein.
Length = 470
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 448 PQTYQNVPAQSPQGYQI--NSSSQIRIVNQMLLNHLETTNP 564
PQ P S QG Q N +Q+ N+++LNH T P
Sbjct: 380 PQLQPPSPTPSTQGVQDPPNGKTQVTNYNRVMLNHRSVTKP 420
>M12927-1|AAA70218.1| 451|Drosophila melanogaster unknown protein
protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQMLLNHLETTN 561
QT ++ AQ+PQ +++SSS+ R + NH +N
Sbjct: 335 QTNKDTQAQAPQPMEVDSSSRFRQRTEHYQNHPNESN 371
>EF591043-1|ABQ84944.1| 451|Drosophila melanogaster gag protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQMLLNHLETTN 561
QT ++ AQ+PQ +++SSS+ R + NH +N
Sbjct: 335 QTNKDTQAQAPQPMEVDSSSRFRQRTEHYQNHPNESN 371
>EF591042-1|ABQ84942.1| 451|Drosophila melanogaster gag protein
protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQMLLNHLETTN 561
QT ++ AQ+PQ +++SSS+ R + NH +N
Sbjct: 335 QTNKDTQAQAPQPMEVDSSSRFRQRTEHYQNHPNESN 371
>DQ887187-1|ABI48305.1| 451|Drosophila melanogaster gag protein
protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQMLLNHLETTN 561
QT ++ AQ+PQ +++SSS+ R + NH +N
Sbjct: 335 QTNKDTQAQAPQPMEVDSSSRFRQRTEHYQNHPNESN 371
>DQ887186-1|ABI48302.1| 451|Drosophila melanogaster gag protein
protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQMLLNHLETTN 561
QT ++ AQ+PQ +++SSS+ R + NH +N
Sbjct: 335 QTNKDTQAQAPQPMEVDSSSRFRQRTEHYQNHPNESN 371
>BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p
protein.
Length = 1105
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 394 DTVELARDMRVVADQVSNFAESIFEGKHFAHSSEAND 284
+ ++AR +RVV ++ N + + E K AHS +D
Sbjct: 120 ERADVARKVRVVLSEIFNLQQQVSEQKPAAHSEMLDD 156
>AF033821-3|AAC82603.1| 451|Drosophila melanogaster Prgag protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQMLLNHLETTN 561
QT ++ AQ+PQ +++SSS+ R + NH +N
Sbjct: 335 QTNKDTQAQAPQPMEVDSSSRFRQRTEHYQNHPNESN 371
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 451 QTYQNVPAQSPQGYQINSSSQIRIVNQMLLNHLETTN 561
QT ++ AQ+PQ +++SSS+ R + NH +N
Sbjct: 335 QTNKDTQAQAPQPMEVDSSSRFRQRTEHYQNHPNESN 371
>AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA
protein.
Length = 1105
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 394 DTVELARDMRVVADQVSNFAESIFEGKHFAHSSEAND 284
+ ++AR +RVV ++ N + + E K AHS +D
Sbjct: 120 ERADVARKVRVVLSEIFNLQQQVSEQKPAAHSEMLDD 156
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,482,271
Number of Sequences: 53049
Number of extensions: 477656
Number of successful extensions: 2270
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2266
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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