Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30945
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr...    41   8e-04
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p...    41   8e-04
Z72503-5|CAI79155.1|  513|Caenorhabditis elegans Hypothetical pr...    41   8e-04
Z99171-6|CAB16309.2|  128|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    29   3.6  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    29   3.6  
L14433-7|AAA27972.1|  469|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z66496-5|CAA91280.2|  507|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    27   8.2  
AC024848-5|AAK68545.1|  254|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
            C26C6.1a protein.
          Length = 1883

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 8    QNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEI 112
            +NP+A FGEVSKIV   W  L  E K  Y+ + E+
Sbjct: 1470 ENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEV 1504


>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
            protein C26C6.1a protein.
          Length = 1883

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 8    QNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEI 112
            +NP+A FGEVSKIV   W  L  E K  Y+ + E+
Sbjct: 1470 ENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEV 1504


>Z72503-5|CAI79155.1|  513|Caenorhabditis elegans Hypothetical
           protein C26C6.1b protein.
          Length = 513

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 8   QNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEI 112
           +NP+A FGEVSKIV   W  L  E K  Y+ + E+
Sbjct: 100 ENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEV 134


>Z99171-6|CAB16309.2|  128|Caenorhabditis elegans Hypothetical
           protein F47G4.6 protein.
          Length = 128

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 14  PNASFGEVSKIVASMWDGLDSEHKSVYKQKTE 109
           P A+FG++S+ +A  WD L  E K  YKQ+ E
Sbjct: 72  PYATFGQISQKIARQWDSLTEEEKKAYKQRCE 103


>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +3

Query: 459 PECSSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPTQSPTNYPASSSMSPP 611
           P    PI+TG S     +     P  A  P +  P  SP+  PA  S SPP
Sbjct: 442 PTIKFPISTGTSYS--STTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPP 490


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 447  SPNIPECSSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPTQSPTNYPASSSMSP 608
            S N+    + I  GLS     +N    PNV  S    QP+   T  P  S++SP
Sbjct: 2023 SLNLANSCASIDGGLSGCCCSTNNCVGPNVLPSAGTTQPSTVSTLSPIVSTLSP 2076


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +3

Query: 459 PECSSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPTQSPTNYPASSSMSPP 611
           P    PI+TG S     +     P  A  P +  P  SP+  PA  S SPP
Sbjct: 449 PTIKFPISTGPSYS--STTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPP 497


>L14433-7|AAA27972.1|  469|Caenorhabditis elegans Hypothetical
           protein C50C3.1 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +3

Query: 447 SPNIPECSSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPTQSPTNYPASSS 599
           SP+IP+C SP+      ++F++N +    V     +  P   P+++PA ++
Sbjct: 278 SPDIPQCVSPV-QNTYQQIFENNTDTSDEVQDF--SIPPPPYPSSFPAPTT 325


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
            C10C6.1 protein.
          Length = 1565

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 468  SSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPT 566
            SSP  +G    L  S Q+  PN++   R+YQPT
Sbjct: 1490 SSPNNSGFVQDLISSRQS--PNLSARRRSYQPT 1520


>Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical
           protein F42G4.3a protein.
          Length = 603

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 507 KSNQ--NCQPNVAQSPRNYQPTQSPTNYPASSSMS 605
           K NQ  +  P++ Q PR   P  S  NY A++S S
Sbjct: 362 KLNQPADTSPSIVQYPRRQAPDSSRANYSATTSTS 396


>Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical
           protein C06G8.4 protein.
          Length = 318

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -1

Query: 122 LFLLFLSFVCKHFYVLSLNHPTLKQLSLKL 33
           L+LLFLSFV + +YV+    PT K L + +
Sbjct: 104 LWLLFLSFVYR-YYVIIRQEPTKKVLQISV 132


>Z66496-5|CAA91280.2|  507|Caenorhabditis elegans Hypothetical
           protein E04D5.3 protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 534 VAQSPRNYQPTQSPTNYPASSSMSPPG 614
           VA S      TQ+P +YP+S +  PPG
Sbjct: 318 VASSRYPIPTTQAPASYPSSPAPPPPG 344


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +3

Query: 540  QSPRNYQPTQSPTNY-PASSSMSPPGYRE 623
            Q P +YQ +  P NY P      PP Y++
Sbjct: 2741 QPPPSYQQSSYPNNYQPGQQGNQPPNYQQ 2769


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
            protein.
          Length = 1565

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 468  SSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPT 566
            SSP  +G    L  S Q+  PN++   R+YQPT
Sbjct: 1490 SSPNNSGFVQDLISSRQS--PNLSARRRSYQPT 1520


>AC024848-5|AAK68545.1|  254|Caenorhabditis elegans Hypothetical
           protein Y67D8A.3 protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +3

Query: 453 NIPECSSPITTGLSNKLFKSNQNCQPNVAQSPRNYQPTQSPTNYPASSSMSPP 611
           N  + ++ + T + N++  +  N  P +       QPTQ P+  P++ S++PP
Sbjct: 187 NWEQITNIVRTTMLNQILMNPTNVSPALISFL--LQPTQQPSFEPSTMSLAPP 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,921,502
Number of Sequences: 27780
Number of extensions: 238872
Number of successful extensions: 946
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)