Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30941X
         (460 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P73381 Cluster: Slr2078 protein; n=10; Cyanobacteria|Re...    34   1.7  
UniRef50_UPI000023DDF7 Cluster: hypothetical protein FG05032.1; ...    32   6.8  
UniRef50_Q7TUA2 Cluster: Possible Virion host shutoff protein; n...    32   6.8  
UniRef50_Q06J46 Cluster: Uncharacterized membrane protein ycf78;...    32   6.8  
UniRef50_A5K660 Cluster: Erythrocyte membrane-associated antigen...    31   9.0  

>UniRef50_P73381 Cluster: Slr2078 protein; n=10; Cyanobacteria|Rep:
           Slr2078 protein - Synechocystis sp. (strain PCC 6803)
          Length = 194

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 236 WHLPPSRLQRYHYTNSDKAFVCLHCQLRENT 328
           WHLPPS LQ++H   S        C++R +T
Sbjct: 2   WHLPPSNLQKWHLCQSQMVLNNPWCRVRRDT 32


>UniRef50_UPI000023DDF7 Cluster: hypothetical protein FG05032.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05032.1 - Gibberella zeae PH-1
          Length = 841

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 150 VFDDLEGKRA-YGPLLGELITSMDIKTQLNGTCRHRGYNVIIIQIVI 287
           VF +L G RA YG   G+ +    +K+  NGTC   GY+  ++++ +
Sbjct: 740 VFWNLAGGRAGYGQTSGDPVAPKPVKSDENGTCLVSGYSQGLLKVFL 786


>UniRef50_Q7TUA2 Cluster: Possible Virion host shutoff protein; n=1;
           Prochlorococcus marinus subsp. pastoris str.
           CCMP1986|Rep: Possible Virion host shutoff protein -
           Prochlorococcus marinus subsp. pastoris (strain CCMP
           1378 / MED4)
          Length = 79

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 191 KWSVSSFAFEIIKNLRLSPSAFND 120
           +WS S+  FEII NL+ SPSA  D
Sbjct: 6   RWSESNKNFEIIMNLKTSPSAIQD 29


>UniRef50_Q06J46 Cluster: Uncharacterized membrane protein ycf78;
           n=1; Bigelowiella natans|Rep: Uncharacterized membrane
           protein ycf78 - Bigelowiella natans (Pedinomonas
           minutissima) (Chlorarachnion sp.(strain CCMP 621))
          Length = 885

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 22/67 (32%), Positives = 31/67 (46%)
 Frame = +3

Query: 258 YNVIIIQIVIRLLCVCIVSYVKTREKETKNFASCYLWKGRCFIRPKVXASIDLNLDIGSF 437
           YNVIII+++ R   V I S       E KNF +   +     I     ASI  N D+G  
Sbjct: 314 YNVIIIRLLFRFHKVFITSNNNKTNSEFKNFMNLVGFNTLVLIIGVTIASIS-NFDVGYL 372

Query: 438 SSEAISF 458
            + ++ F
Sbjct: 373 LTSSLGF 379


>UniRef50_A5K660 Cluster: Erythrocyte membrane-associated antigen,
            putative; n=3; cellular organisms|Rep: Erythrocyte
            membrane-associated antigen, putative - Plasmodium vivax
          Length = 4214

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 248  PSRLQRYHYTNSDKAFVCLHCQLRENTR 331
            P RL R H+ N   +F CL C L ++TR
Sbjct: 2893 PERLPRGHHPNCFDSFDCLDCSLTQSTR 2920


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,336,117
Number of Sequences: 1657284
Number of extensions: 7672124
Number of successful extensions: 16970
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16964
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)