Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30941X
         (460 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AC084155-3|AAY86295.1|  129|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical
           protein R05H5.1 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 252 RGYNVIIIQIVIRLLCVCIVSYVKTREKETKNFASCYLWKGRC-FIRP 392
           R Y + I+   +     CI+S+   ++    +F+  Y++ G C ++ P
Sbjct: 55  RSYAIYILNFALFDFATCIISFFSCQQVIFSDFSLVYIFHGPCKYVSP 102


>AC084155-3|AAY86295.1|  129|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.4 protein.
          Length = 129

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -1

Query: 454 LIASEEKLPISRFKSIEASTFGRIKHRPFHK*HDAKFFVSFSRVFT*LT 308
           LI + E L    F ++    F + KH  F + +D   F +FSR+F  LT
Sbjct: 4   LIKTPEYLYSQEFDALFHYLFNQYKHGVFGRFNDHTDFQAFSRMFQKLT 52


>Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical
           protein K05D4.6 protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 198 HQEVVRKLVCLRDHQKPKIK 139
           +QE   KL C R H KPKI+
Sbjct: 301 YQEFCAKLFCRRFHSKPKIE 320


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,996,121
Number of Sequences: 27780
Number of extensions: 191109
Number of successful extensions: 430
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)