Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30940
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 5e-38
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 106 1e-23
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 98 7e-21
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 76 2e-14
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 75 4e-14
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 74 9e-14
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 71 1e-12
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 60 2e-09
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 56 2e-08
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 56 3e-08
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 52 3e-07
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 48 9e-06
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 46 2e-05
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 45 5e-05
SB_732| Best HMM Match : AAA (HMM E-Value=0) 41 8e-04
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 35 0.070
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 34 0.092
SB_54337| Best HMM Match : Ank (HMM E-Value=0.0052) 31 0.86
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 30 2.0
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 29 2.6
SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0) 29 2.6
SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 29 2.6
SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38) 29 3.5
SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 29 4.6
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 29 4.6
SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_25750| Best HMM Match : AFG1_ATPase (HMM E-Value=5.6e-12) 28 6.0
SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) 28 6.0
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 28 6.0
SB_29265| Best HMM Match : OmpH (HMM E-Value=3) 28 8.0
SB_50904| Best HMM Match : NACHT (HMM E-Value=2.3e-05) 28 8.0
SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08) 28 8.0
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 28 8.0
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 154 bits (374), Expect = 5e-38
Identities = 77/85 (90%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 KIKVNKTLPYLVSNVIELLDVDPQE-EEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVI 178
KIKVNKTLPYLVSNVIELLDVDPQ+ EEDGA VDLDSQRKGKCAVIKTSTRQTYFLPVI
Sbjct: 46 KIKVNKTLPYLVSNVIELLDVDPQDYAEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPVI 105
Query: 179 GLVDAEKLKPGDLVGVNKDSYLILE 253
GLV+ E L PGDLVGVNKDSYLILE
Sbjct: 106 GLVEPENLTPGDLVGVNKDSYLILE 130
Score = 98.7 bits (235), Expect = 4e-21
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +3
Query: 528 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 677
Q+ +MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 211
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = +1
Query: 247 LRKLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQEL 360
L KLPAEYD+RVKAMEVDERPTEQYSDIGGLD+QIQE+
Sbjct: 129 LEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQEM 166
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 106 bits (255), Expect = 1e-23
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +1
Query: 256 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGV 435
LP + D V M+V+E+P YSDIGG +QI +L E V P+ H E+FVNLGI PPKGV
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGV 121
Query: 436 LLYGPPGTGKTLLARACAAQTKSTF 510
LL+GPPGTGKTL ARA A +T + F
Sbjct: 122 LLFGPPGTGKTLCARAVANRTDACF 146
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 674
+++ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD
Sbjct: 147 IRVIGSELVQKYVGEGARMVRELFEMARTKKACIVFFDEIDAIGGARFDDGAGGD 201
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 106 bits (255), Expect = 1e-23
Identities = 49/85 (57%), Positives = 63/85 (74%)
Frame = +1
Query: 256 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGV 435
L + D V M++++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI PPKGV
Sbjct: 358 LSDDADPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGV 417
Query: 436 LLYGPPGTGKTLLARACAAQTKSTF 510
+LYG PGTGKTLLA+A A QT +TF
Sbjct: 418 ILYGQPGTGKTLLAKAVANQTSATF 442
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +1
Query: 262 AEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLL 441
AE D V M V++ P Y +GGLDKQI+E+ E + LP+ H E F LGI PKGVLL
Sbjct: 157 AEVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLL 216
Query: 442 YGPPGTGKTLLARACAAQTKSTF 510
YGPPGTGKTLLARA A T+ TF
Sbjct: 217 YGPPGTGKTLLARAVAHHTECTF 239
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 14/69 (20%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAK--------------EKAPAIIFIDELDAIGTK 647
++++G +LVQ FIG+GA++VR+ F +A+ E AP+IIF+DE+D+IG+
Sbjct: 240 IRVSGSELVQKFIGEGARMVRELFVMARHGENLQAMYFVDSREHAPSIIFMDEIDSIGSS 299
Query: 648 RFDSEKAGD 674
R + GD
Sbjct: 300 RLEGGSGGD 308
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 97.9 bits (233), Expect = 7e-21
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +1
Query: 256 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGV 435
LP E D+ + + +E+P Y++IGG+D Q QE+ EAV LP+TH E + +GI PP+GV
Sbjct: 142 LPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGV 201
Query: 436 LLYGPPGTGKTLLARACAAQTKSTF 510
LLYGPPG GKT+LA+A A T + F
Sbjct: 202 LLYGPPGCGKTMLAKAVAHHTTAAF 226
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 677
+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++ DR
Sbjct: 227 IRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADR 282
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/102 (39%), Positives = 57/102 (55%)
Frame = +1
Query: 151 PANIFLARHRLGRCRETQTRRLGRSQQRLLFDLRKLPAEYDARVKAMEVDERPTEQYSDI 330
P + R ++ + + Q R+ L +R LP E D V M ++ YSD+
Sbjct: 79 PRYVVGCRRQVDKAKLKQGTRVALDMTTLTI-MRYLPREVDPLVYNMSHEDPGNISYSDV 137
Query: 331 GGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPG 456
GGL +QI+EL E + LP+T+ E F +GI PPKG LL+GPPG
Sbjct: 138 GGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +1
Query: 295 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 474
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 301 VVEVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 360
Query: 475 ARACAAQTKSTF 510
A+A A + ++ F
Sbjct: 361 AKAIANECQANF 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 650
+ + GP+L+ M+ G+ VRD F A+ AP ++F DELD+I R
Sbjct: 373 ISIKGPELLTMWFGESEANVRDVFDKARSAAPCVLFFDELDSIAKSR 419
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 74.5 bits (175), Expect = 7e-14
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Frame = +1
Query: 208 RRLGRSQQRLLFDLRKLPAEYDA-RVKAM-EVD-ERPTEQYSDIGGLDKQIQELIEAVVL 378
+R R ++ LL + A + R AM EV E P +SD+GG + ++L EAV
Sbjct: 496 QRDARIKRELLVSSEDMRAAFRCVRPSAMREVALEVPKVHWSDVGGNEMIKRKLKEAVEW 555
Query: 379 PMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 510
P+ H E F LGI PP+G+L+YGPPG KTL+ARA A ++ F
Sbjct: 556 PLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALATESGLNF 599
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +1
Query: 319 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 498
+ IGGL QIQ + E + +P+T+ E F G+ PP+G+LLYGP GTGKT++ARA A +T
Sbjct: 255 FQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVANET 314
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 468 IAGESLRCSNKVYILKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTK 647
+ +L + + + + GP+L ++G+ K VR+ F A+ AP+I+F DELDAI +
Sbjct: 586 LIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLKARATAPSIVFFDELDAIAGQ 645
Query: 648 R 650
R
Sbjct: 646 R 646
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +3
Query: 501 VYILKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 650
V+ + GP+++ + G+ +R+ F A+ K+P+I+FIDELDA+ +R
Sbjct: 316 VHFFCINGPEVLSRYYGETEARLREIFTEAQNKSPSIVFIDELDALCPRR 365
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 74.1 bits (174), Expect = 9e-14
Identities = 36/72 (50%), Positives = 48/72 (66%)
Frame = +1
Query: 274 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPP 453
A V M VD + ++ +GGL+KQIQ L E ++ P+ + E F I PP+GVL +GPP
Sbjct: 870 ADVDPMSVDRKV--KFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPP 927
Query: 454 GTGKTLLARACA 489
GTGKTL+ARA A
Sbjct: 928 GTGKTLVARALA 939
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 468 IAGESLRCSNKVYILKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTK 647
+A E + KV G + ++G+ + +R F A P+IIF DE+D +
Sbjct: 938 LANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPV 997
Query: 648 R 650
R
Sbjct: 998 R 998
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +1
Query: 283 KAME--VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPG 456
K ME V +PT ++ D+GGL+ Q L +A+ P+ H E F +G+ P+GVLLYGPPG
Sbjct: 470 KGMEGVVRLQPT-RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPG 528
Query: 457 TGKTLLARACAAQTKSTF 510
KT L RA A+ T TF
Sbjct: 529 CCKTTLVRAAASSTHCTF 546
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 328 IGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 474
+ GLD I+ L E V P+ + E F +LGI+ PKG+LL G PG GKTLL
Sbjct: 213 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 261
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 650
+ L+ QL ++GD + +R+ + P ++F+DELD++ KR
Sbjct: 547 MSLSCAQLFSSYVGDAERTLRELVL----QLPLLLFLDELDSLAGKR 589
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +1
Query: 304 RPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARA 483
+PT ++ D+GGL+ Q L +A+ P+ H E F +G+ P+GVLLYGPPG KT L RA
Sbjct: 8 QPT-RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRA 66
Query: 484 CAAQTKSTF 510
A+ T TF
Sbjct: 67 AASSTHCTF 75
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 650
+ L+ QL ++GD + +R+ F A+ APAI+F+DELD++ KR
Sbjct: 76 MSLSCAQLFSSYVGDAERTLRELFLKARATAPAILFLDELDSLAGKR 122
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +1
Query: 256 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGV 435
L A + A+ + P + D+GGLD +E+++ + LP+ H E F G+ GV
Sbjct: 790 LDALQASHADAIGAPKIPDISWKDVGGLDSVKEEILDTIQLPLLHPELFA-AGLRR-SGV 847
Query: 436 LLYGPPGTGKTLLARACAAQTKSTF 510
LLYGPPGTGKTL+A+A A + F
Sbjct: 848 LLYGPPGTGKTLMAKAVATECSLNF 872
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 671
L + GP+L+ M++G + VR+ F+ A+ +P +IF DELD++ R S +G
Sbjct: 873 LSVKGPELINMYVGQSEQNVREVFSRAQAASPCVIFFDELDSLAPNRGRSGDSG 926
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 343 KQIQELIEAVVLPMTHKEKFVNLGIHPP-KGVLLYGPPGTGKTLLARACAAQ 495
K QE +E ++ P K VN PP VLL G PGTGK + A ++Q
Sbjct: 520 KTSQEKLEKIIRPYLSKR--VN---GPPFVQVLLTGLPGTGKRAICMAVSSQ 566
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 316 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 495
+++DIGG +++ + +++ M H E F LG+ P G LL+GPPG GKTLLA A A +
Sbjct: 675 KFADIGGCSNTLEQ-VGKLLVHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGE 733
Query: 496 TKSTF 510
+ F
Sbjct: 734 LEMPF 738
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 677
LKLA ++V G+ + VR+ F A +AP I+F+DE+DAI KR ++ K +R
Sbjct: 739 LKLAATEIVSGVSGESEEKVRELFTSAVAQAPCILFLDEIDAITPKRENASKDMER 794
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Frame = +1
Query: 280 VKAMEVD---ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGP 450
V+A+E D + P ++DI L + + L EAVVLP+ + F + P +GVL+ GP
Sbjct: 233 VEALERDILQKNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGP 291
Query: 451 PGTGKTLLARACAAQTKSTF 510
PGTGKT+LA+A A + +TF
Sbjct: 292 PGTGKTMLAKAVATECGTTF 311
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 531 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDR 677
L + G+ KLVR F +A+ AP+ IF+DE+D+I ++R DSE R
Sbjct: 319 LTSKYRGESEKLVRILFEMARFYAPSTIFVDEIDSICSRRGSDSEHEASR 368
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 501 VYILKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 650
V L ++G + ++MF+G G VRD FA A++ AP IIFIDE+DA+G R
Sbjct: 107 VPFLSISGSEFLEMFVGVGPARVRDLFAQARKNAPCIIFIDEIDAVGRAR 156
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +1
Query: 316 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 495
++ D+ G ++ E++E V + + +++ LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 46 EWIDVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAGE 104
Query: 496 TKSTF 510
F
Sbjct: 105 AGVPF 109
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +3
Query: 501 VYILKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 671
V L +AG V+MF G G+ VRD F A++ AP I++IDE+DAIG R S G
Sbjct: 184 VPFLSMAGSDFVEMFAGVGSARVRDLFTRARKLAPCIVYIDEVDAIGRSRKSSRSMG 240
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1
Query: 250 RKLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPK 429
+K+P+ Y + ++ + ++ D+ G+ + E++E V + ++ LG PK
Sbjct: 103 QKIPSMYGK--DECPIFDKGSARFKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPK 159
Query: 430 GVLLYGPPGTGKTLLARACAAQTKSTF 510
G LL GPPGTGKTLLA+A A + F
Sbjct: 160 GALLVGPPGTGKTLLAKAVATEADVPF 186
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 328 IGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 474
+ GLD I+ L E V P+ + E F +LGI+ PKG+LL G PG GKTLL
Sbjct: 43 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 91
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +3
Query: 519 AGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 650
+G + +MF+G GA VR+ FA AKE AP I+F+DELDAIG R
Sbjct: 196 SGSEFDEMFVGVGAARVRNLFAAAKEHAPCIVFVDELDAIGGSR 239
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +1
Query: 298 DERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLA 477
DE ++Y + +++QE++E + P EKF LG P GVLL G PGTGKTLLA
Sbjct: 126 DESVRKEYLKVDEAKEELQEVVEFLRNP----EKFKRLGGKLPTGVLLIGSPGTGKTLLA 181
Query: 478 RACAAQTKSTF 510
+A A + F
Sbjct: 182 KAVAGEAGVPF 192
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/57 (35%), Positives = 36/57 (63%)
Frame = +3
Query: 501 VYILKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 671
+ + + GP+L+ M++G+ + VR F A+ AP +IF DELD++ +R S ++G
Sbjct: 43 INFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDELDSLCPRRSGSSESG 99
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 379 PMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 510
P+ H E+F LG+ P G+LL GPPG GKTLLA+A A ++ F
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINF 45
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 379 PMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 510
P+ H E+F LG+ P G+LL GPPG GKTLLA+A A ++ F
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINF 45
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +3
Query: 492 SNKVYILKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 671
+N + ++ LV ++G+ +LV+ F LA+E P+IIFIDE+D++ R ++E
Sbjct: 189 ANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEVDSLCGSRSENESES 248
Query: 672 DR 677
R
Sbjct: 249 AR 250
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 295 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYG 447
V E+P ++SDI GL+ + L EAV+LP+ F P +G+LLYG
Sbjct: 88 VMEKPNVKWSDIAGLESAKEALKEAVILPIKFPHLFTGKRT-PWRGILLYG 137
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 546 IGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 677
+G+G K+VR FA+A+ PA+IF+DE+D++ T+R D E R
Sbjct: 1 VGEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASR 44
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDR 677
+ + GP+L+ +IG + VRD F A+ P I+F DE D++ +R DS DR
Sbjct: 730 ISIKGPELLSKYIGASEQAVRDMFTRAQSAKPCILFFDEFDSLAPRRGHDSTGVTDR 786
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +1
Query: 319 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 498
+ ++GGL L E ++ P F + G+LLYGPPGTGKTLLA A +
Sbjct: 666 WENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKEC 725
Query: 499 KSTF 510
F
Sbjct: 726 GLNF 729
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 409 LGIHPPKGVLLYGPPGTGKTLLAR 480
+G+ KG+LL+GPPGTGKTL+AR
Sbjct: 177 MGLKHVKGILLFGPPGTGKTLMAR 200
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = +3
Query: 516 LAGPQLVQMFIGDGAKLVRDAFALAKEK--------APAIIFIDELDAIGTKRFDSEKAG 671
++GP+++ F+G+ +R FA A+E+ A +I DE DA+ R+ G
Sbjct: 214 ISGPEVLNKFVGESEANIRKLFAEAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTGG 273
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/51 (31%), Positives = 33/51 (64%)
Frame = +1
Query: 337 LDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 489
L ++E + ++ + ++ ++ N G++ + +L YGPPGTGKT+ A++ A
Sbjct: 304 LKPNLEEHLSSISIATSNTKR--NKGMY--RNLLFYGPPGTGKTMFAKSLA 350
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 337 LDKQIQELIEAVVLPMTHKEK-FVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 495
LD+ I E I A V + +++ GI +G LLYGPPG GK+ +A A +
Sbjct: 192 LDEGIAEGILADVKEFIGSPRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALAGE 245
>SB_54337| Best HMM Match : Ank (HMM E-Value=0.0052)
Length = 511
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 391 KEKFVNLGIHPPKGVLLYGPPGTGKT 468
+ + +NL +PP+ V+L G GTGKT
Sbjct: 414 EHRIINLRPNPPRSVILLGRSGTGKT 439
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 433 VLLYGPPGTGKTLLARACAAQ 495
+L YGPPGTGKT A A Q
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 424 PKGVLLYGPPGTGKTLLARACAAQTKSTF 510
P LL+GPPGTGKT+ Q F
Sbjct: 591 PTPYLLFGPPGTGKTVTLVEAMLQVHRNF 619
>SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1736
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 436 LLYGPPGTGKTLLARACAAQTKST 507
LL GP G GK +L R C Q +ST
Sbjct: 690 LLVGPEGCGKEMLLRHCFEQLRST 713
>SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 376 LPMTHKEKFVNLGIHPPKGVLLYGPPGTGKT 468
L ++ +E V + P+ +++GPPGTGKT
Sbjct: 235 LDLSQREA-VGFALRQPEVAVIHGPPGTGKT 264
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 412 GIHPPKGVLLYGPPGTGKTL 471
G P L++GPPGTGKT+
Sbjct: 547 GTSRPHPYLIFGPPGTGKTI 566
>SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38)
Length = 597
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 265 EYDARVKAMEVDERPTEQYSDIGGL---DKQ-IQELIEAVV 375
EYD R+KA E +QY D+ L DKQ I L EAVV
Sbjct: 523 EYDKRIKAFEESGDKPQQYVDLTRLRCDDKQTIVALAEAVV 563
>SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 50 ELLDVDPQEEEEDGAVVD 103
+++D+ PQ+EEEDG V++
Sbjct: 527 DIVDLQPQDEEEDGEVIE 544
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 582 ALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR 677
A A+E+ P++I + DA + R DSE GDR
Sbjct: 2674 APARERDPSVIDVYSSDARDSSRADSETDGDR 2705
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 433 VLLYGPPGTGKTLLARACA 489
+LL GP G+GKTLLA+ A
Sbjct: 273 ILLLGPTGSGKTLLAQTIA 291
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 50 ELLDVDPQEEEEDGAVVD 103
+++D+ PQ+EEEDG V++
Sbjct: 982 DIVDLQPQDEEEDGEVIE 999
>SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 50 ELLDVDPQEEEEDGAVVD 103
+++D+ PQ+EEEDG V++
Sbjct: 22 DIVDLQPQDEEEDGEVIE 39
>SB_25750| Best HMM Match : AFG1_ATPase (HMM E-Value=5.6e-12)
Length = 424
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 424 PKGVLLYGPPGTGKTLL 474
PKG+ LYG G+GKT+L
Sbjct: 8 PKGLYLYGGVGSGKTIL 24
>SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09)
Length = 1703
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 322 SDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKT 468
+ +GG +I ++I + ++L IH K +L GP GTGK+
Sbjct: 80 TSLGGKGTRINDII-VPTMDTARYSYLMDLMIHNNKPLLFVGPTGTGKS 127
>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2324
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 506 VDFV*AAQALASNVFPVPGGPYKRTPLGGWMPRFTNFSLC 387
+D A+ L+SN FP P P WMP FT C
Sbjct: 1059 IDLREMAKVLSSN-FPAPSAPQAPMSAPSWMPVFTEGPGC 1097
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 421 PPKGVLLYGPPGTGKTLLARACA 489
PP V + GPP +GKTL+A+ A
Sbjct: 318 PPCKVCVLGPPHSGKTLVAKQLA 340
>SB_29265| Best HMM Match : OmpH (HMM E-Value=3)
Length = 218
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 53 LLDVDPQEEE--EDGAVVDLDSQ--RKGKCAVIKTSTRQTYFLPVIGLVD 190
L D D E E +D VD++++ KGK K+S + Y PV+ L D
Sbjct: 25 LCDTDAPEAEVVDDEPEVDVETETEEKGKAETKKSSEPEEYTPPVVALED 74
>SB_50904| Best HMM Match : NACHT (HMM E-Value=2.3e-05)
Length = 1122
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 449 LLVQGRHCWRELALLKQSLHFEAGWSTTCADVHW*WCQACPRRLCI 586
L+V+ R+ WR +LLK L +ST+ + +H +AC +RL +
Sbjct: 43 LIVKSRNLWRSRSLLKAPLSLR--YSTSSSKIHR-AERACDQRLAV 85
>SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08)
Length = 1213
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 502 TLFEQRKLSPAMSSLYQEVHIKELLWVGGCRDS 404
T+F+ K + +L + +H+ +LWV CR++
Sbjct: 143 TIFKDGKKATREKALKKGIHLVTVLWVESCRET 175
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 427 KGVLLYGPPGTGKTLLARACA 489
K LL GPPG GKT LA A
Sbjct: 381 KVALLCGPPGLGKTTLAHVIA 401
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +1
Query: 286 AMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGK 465
A++ DE EQ + I L Q E + + ++ + +LL P G GK
Sbjct: 1082 AVQFDEDEEEQLTPITSLPMYAQAAFEGYPTLNRIQSRLCETALNSDENLLLCAPTGAGK 1141
Query: 466 TLLA 477
T +A
Sbjct: 1142 TNVA 1145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,554,290
Number of Sequences: 59808
Number of extensions: 487149
Number of successful extensions: 1725
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -